RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 FN3KQ9H479 309 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 ACTR3BQ9P1U1 418 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 STARD10Q9Y365 291 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 IGLV1-36A0A0B4J1U3 117 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 B4DSR2 109 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 TNFRSF11BO00300 401 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 PHF1O43189 567 aaPredicted RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 ICMTO60725 284 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 RENP00797 406 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 DBHP09172 617 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 GAAP10253 952 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 GSTM3P21266 225 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 GSSP48637 474 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 SRSF2Q01130 221 aaKnown RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 PPP1R8Q12972 351 aaKnown RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 PSG7Q13046 419 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 HNRNPA0Q13151 305 aaKnown RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 CLEC12AQ5QGZ9 265 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 SLC35F1Q5T1Q4 408 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 CORO6Q6QEF8 472 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 ZNF620Q6ZNG0 422 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 OR6V1Q8N148 313 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 CCL17Q92583 94 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 RPRD1BQ9NQG5 326 aaKnown RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 TBCCD1Q9NVR7 557 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
GPN3-201ENST00000228827 B9D1Q9UPM9 204 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 LYVE1Q9Y5Y7 322 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 RTTNQ86VV8 2226 aa12.09□□□□□ -0.47
GPN3-201ENST00000228827 SVEP1Q4LDE5 3571 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 TCRBV5S2A0A599 114 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 OR6C6A6NF89 314 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 CLDN25C9JDP6 229 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 H3BSA7 217 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 ARPC3O15145 178 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 KRT36O76013 467 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 FAM107AO95990 144 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 TFP02787 698 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 ERFP50548 548 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 TSPAN31Q12999 210 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 KCNMB1Q16558 191 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 HFEQ30201 348 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 SPRNQ5BIV9 151 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 MTX3Q5HYI7 312 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 FAM209AQ5JX71 171 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 GLCCI1Q86VQ1 547 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 DHFR2Q86XF0 187 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 NPEPL1Q8NDH3 523 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 CMBLQ96DG6 245 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 ELMOD3Q96FG2 381 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 BTBD10Q9BSF8 475 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 LHFPL6Q9Y693 200 aa12.08□□□□□ -0.47
GPN3-201ENST00000228827 OR6C68A6NDL8 312 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 HLA-DQA2P01906 255 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 CALB2P22676 271 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 SRP14P37108 136 aaKnown RBP12.08□□□□□ -0.48
GPN3-201ENST00000228827 RBMXP38159 391 aaKnown RBP12.08□□□□□ -0.48
GPN3-201ENST00000228827 DVL1P1P54792 670 aaPredicted RBP12.08□□□□□ -0.48
GPN3-201ENST00000228827 LMO4P61968 165 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 MS4A2Q01362 244 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.08□□□□□ -0.48
GPN3-201ENST00000228827 LINC00346Q8IVM7 164 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 OR52E2Q8NGJ4 325 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 HIF1ANQ9NWT6 349 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 KLHL21Q9UJP4 597 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
GPN3-201ENST00000228827 WIPI2Q9Y4P8 454 aa12.08□□□□□ -0.48
GPN3-201ENST00000228827 ISPDA4D126 451 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 DYNC1I1O14576 645 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 CCNB2O95067 398 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 GASTP01350 101 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 LIPAP38571 399 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 TNFAIP6P98066 277 aaPredicted RBP12.07□□□□□ -0.48
GPN3-201ENST00000228827 HLXQ14774 488 aaPredicted RBP12.07□□□□□ -0.48
GPN3-201ENST00000228827 LCN8Q6JVE9 175 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 PHC2Q8IXK0 858 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 OR5AS1Q8N127 324 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 ARHGAP24Q8N264 748 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 GJC3Q8NFK1 279 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 OR2Z1Q8NG97 314 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 OR52L1Q8NGH7 329 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 OR4C15Q8NGM1 316 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 TMEM186Q96B77 213 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 CCDC124Q96CT7 223 aaKnown RBP12.07□□□□□ -0.48
GPN3-201ENST00000228827 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 CLPTM1LQ96KA5 538 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 PLA2G12AQ9BZM1 189 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 ZNF665Q9H7R5 613 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 VNN3Q9NY84 501 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms