RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 NPIPA5E9PKD4 350 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 OGG1O15527 345 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 ARL6IP5O75915 188 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 PNPP00491 289 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 S100A9P06702 114 aaKnown RBP8.93□□□□□ -0.98
USP11-201ENST00000218348 GALNSP34059 522 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 GZMKP49863 264 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 RPL27P61353 136 aaKnown RBP8.93□□□□□ -0.98
USP11-201ENST00000218348 BDH1Q02338 343 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 ASAH1Q13510 395 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 GPR176Q14439 515 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 RSPO4Q2I0M5 234 aaPredicted RBP8.93□□□□□ -0.98
USP11-201ENST00000218348 GFOD2Q3B7J2 385 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 BCL2L15Q5TBC7 163 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 GRINAQ7Z429 371 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 PLPP5Q8NEB5 264 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 NFAM1Q8NET5 270 aaPredicted RBP8.93□□□□□ -0.98
USP11-201ENST00000218348 RFT1Q96AA3 541 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 EXOSC3Q9NQT5 275 aaKnown RBP8.93□□□□□ -0.98
USP11-201ENST00000218348 NPIPA1Q9UND3 350 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 DNAJC13O75165 2243 aa8.93□□□□□ -0.98
USP11-201ENST00000218348 PRSS37A4D1T9 235 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 H7C2Y5 167 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 EFNA2O43921 213 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 RAMP1O60894 148 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 SMPD2O60906 423 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 TRIM3O75382 744 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 SLC26A5P58743 744 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 DEFA6Q01524 100 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 EIF2B1Q14232 305 aaKnown RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 PPA1Q15181 289 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ZSWIM7Q19AV6 140 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 CDCP2Q5VXM1 449 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 PXKQ7Z7A4 578 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 PLCZ1Q86YW0 608 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 CMTM4Q8IZR5 234 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 GFI1Q99684 422 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 DPCDQ9BVM2 203 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 CHRNA10Q9GZZ6 450 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 CYSLTR2Q9NS75 346 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 NUDT15Q9NV35 164 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 KLHL13Q9P2N7 655 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 MYOTQ9UBF9 498 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 GPN3Q9UHW5 284 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ZFHX2Q9C0A1 2572 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 LOC101059948A0A1B0GTJ6 334 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 EIF4E2O60573 245 aaKnown RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 UPK3AO75631 287 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 MBP02144 154 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 IFI6P09912 130 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 SLC2A1P11166 492 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 GIFP27352 417 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 OTX2P32243 289 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 CDAP32320 146 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 BIDP55957 195 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 MFGE8Q08431 387 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 YOD1Q5VVQ6 348 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 ETFRF1Q6IPR1 90 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 LRRC28Q86X40 367 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 NAXDQ8IW45 347 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ZNF441Q8N8Z8 693 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 PLPP7Q8NBV4 271 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 EDEM2Q9BV94 578 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 MCUBQ9NWR8 336 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 MRPL22Q9NWU5 206 aaKnown RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 NUP210LQ5VU65 1888 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ANXA2P2A6NMY6 339 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 PLPP3O14495 311 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 LMX1BO60663 402 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ITGA10O75578 1167 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 SERPINA3P01011 423 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 APOC3P02656 99 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ANXA2P07355 339 aaKnown RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 GP1BAP07359 652 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ALOX5APP20292 161 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 ZNF41P51814 821 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 C17orf67Q0P5P2 114 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 TMEM176BQ3YBM2 270 aaPredicted RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 WDR38Q5JTN6 314 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 MZT2BQ6NZ67 158 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 KMT5CQ86Y97 462 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 SYS1Q8N2H4 156 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 PRSS35Q8N3Z0 413 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 OR2G2Q8NGZ5 317 aa8.92□□□□□ -0.98
USP11-201ENST00000218348 CMSS1Q9BQ75 279 aaKnown RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 ZMAT3Q9HA38 289 aaKnown RBP8.92□□□□□ -0.98
USP11-201ENST00000218348 A0A1W2PPL8 197 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 SLC19A2O60779 497 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 SLC43A1O75387 559 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 SC5DO75845 299 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 ZFAND5O76080 213 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 TACSTD2P09758 323 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 ADRA2CP18825 462 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 GGTLC2Q14390 218 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 SGCBQ16585 318 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 NUP54Q7Z3B4 507 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 SIAH3Q8IW03 269 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 GLB1L2Q8IW92 636 aa8.91□□□□□ -0.98
USP11-201ENST00000218348 EXD3Q8N9H8 876 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms