RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TEX19Q8NA77 164 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 OR52N4Q8NGI2 321 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 RAB40AQ8WXH6 277 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 NICN1Q9BSH3 213 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 IFT46Q9NQC8 304 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 TAS2R3Q9NYW6 316 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 MTFP1Q9UDX5 166 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 DSPP15924 2871 aaKnown RBP13.53□□□□□ -0.24
EFNB1-201ENST00000204961 SRPX2O60687 465 aaPredicted RBP13.52□□□□□ -0.24
EFNB1-201ENST00000204961 OR4E1P0C645 316 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 FBLP22087 321 aaKnown RBP13.52□□□□□ -0.24
EFNB1-201ENST00000204961 CD38P28907 300 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 EEF1A1P5Q5VTE0 462 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 RADILQ96JH8 1075 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 WDR13Q9H1Z4 485 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 KLHL13Q9P2N7 655 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 IGHV3-15A0A0B4J1V0 119 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 A0A1W2PPC4 97 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 OR5K4A6NMS3 321 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 CD53P19397 219 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 LTBRP36941 435 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 PMPCAQ10713 525 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 MFAP5Q13361 173 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 TMPPEQ6ZT21 453 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 C12orf45Q8N5I9 185 aaPredicted RBP13.52□□□□□ -0.24
EFNB1-201ENST00000204961 OR10H5Q8NGA6 315 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 NPDC1Q9NQX5 325 aaPredicted RBP13.52□□□□□ -0.24
EFNB1-201ENST00000204961 RNF215Q9Y6U7 377 aa13.52□□□□□ -0.24
EFNB1-201ENST00000204961 PLSCR5A0PG75 271 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 TMEM212A6NML5 194 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 SLC33A1O00400 549 aaPredicted RBP13.52□□□□□ -0.25
EFNB1-201ENST00000204961 NMBP08949 121 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 HSD17B7P56937 341 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 RPL27P61353 136 aaKnown RBP13.52□□□□□ -0.25
EFNB1-201ENST00000204961 RPS4XP62701 263 aaKnown RBP13.52□□□□□ -0.25
EFNB1-201ENST00000204961 CHAF1BQ13112 559 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 SLC35D3Q5M8T2 416 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 TRAPPC6BQ86SZ2 158 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 ZSCAN1Q8NBB4 408 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 OR52H1Q8NGJ2 320 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 ASB5Q8WWX0 329 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 OR8B4Q96RC9 309 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 ST6GALNAC5Q9BVH7 336 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 VN1R1Q9GZP7 353 aa13.52□□□□□ -0.25
EFNB1-201ENST00000204961 F5H0A9 414 aaPredicted RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 PPICP45877 212 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 SLC6A9P48067 706 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 NPY4RP50391 375 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ATP1B3P54709 279 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ELOCQ15369 112 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF584Q8IVC4 421 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 OR51E1Q8TCB6 317 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF304Q9HCX3 659 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 FGF21Q9NSA1 209 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 MUC22E2RYF6 1773 aaPredicted RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 TGM6O95932 706 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 CLPSP04118 112 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 CD34P28906 385 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 EPHA4P54764 986 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 RAP2BP61225 183 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF273Q14593 569 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 C14orf28Q4W4Y0 310 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 GLT8D1Q68CQ7 371 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 CLEC9AQ6UXN8 241 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF679Q8IYX0 411 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 LRRC75AQ8NAA5 344 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 SEH1LQ96EE3 360 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 APMAPQ9HDC9 416 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 COMMD9Q9P000 198 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 FER1L5A0AVI2 2057 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 MED19A0JLT2 244 aaPredicted RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 GSTZ1O43708 216 aaPredicted RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 IL33O95760 270 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 IFNA6P05013 189 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 PGCP20142 388 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 GGTLC2Q14390 218 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 EBPQ15125 230 aaKnown RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF684Q5T5D7 378 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 PTCRAQ6ISU1 281 aaPredicted RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 LRRC18Q8N456 261 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ADAD2Q8NCV1 583 aaKnown RBP13.51□□□□□ -0.25
EFNB1-201ENST00000204961 ACKR4Q9NPB9 350 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 LANCL2Q9NS86 450 aa13.51□□□□□ -0.25
EFNB1-201ENST00000204961 LOC100289279A0A1B0GTE1 492 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 FAM74A7A6NL05 159 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 DDAH2O95865 285 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 GIMD1P0DJR0 217 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 ZP3P21754 424 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 HRH1P35367 487 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 GMFBP60983 142 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 GLO1Q04760 184 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 PDCD1Q15116 288 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 FAM74A3Q4VXF1 159 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 ANKRD16Q6P6B7 361 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 BRICD5Q6PL45 260 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 BAIAP2L2Q6UXY1 529 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 ABHD12BQ7Z5M8 362 aaPredicted RBP13.5□□□□□ -0.25
EFNB1-201ENST00000204961 FJX1Q86VR8 437 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 SLC38A9Q8NBW4 561 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms