RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 A0A1W2PQD3 144 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 SIGLEC6O43699 453 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 LMX1BO60663 402 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 NPIPB7O75200 414 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 RLN2P04090 185 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 CD1AP06126 327 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 ITGA5P08648 1049 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 MAPK3P27361 379 aaPredicted RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 FOXF1Q12946 379 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 RBMS2Q15434 407 aaKnown RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 OLFML2AQ68BL7 652 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 LIN54Q6MZP7 749 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 WDR74Q6RFH5 385 aaPredicted RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 OR2AK2Q8NG84 335 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 FBXW5Q969U6 566 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 MFFQ9GZY8 342 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 CGGBP1Q9UFW8 167 aaPredicted RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 IGLV1-36A0A0B4J1U3 117 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 LOC101059948A0A1B0GTJ6 334 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 DCDC2BA2VCK2 349 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 TMEM212A6NML5 194 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 CCSO14618 274 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 DXOO77932 396 aaKnown RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 CALCBP10092 127 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 ZP3P21754 424 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 EGR3Q06889 387 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 GK2Q14410 553 aaPredicted RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 PHF19Q5T6S3 580 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 SLC18B1Q6NT16 456 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 RHBDD2Q6NTF9 364 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 TMEM71Q6P5X7 295 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 HDDC2Q7Z4H3 204 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 NARS2Q96I59 477 aaKnown RBP11.76□□□□□ -0.53
CTNS-201ENST00000046640 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 POFUT1Q9H488 388 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 SIT1Q9Y3P8 196 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 LRP12Q9Y561 859 aa11.76□□□□□ -0.53
CTNS-201ENST00000046640 TMEM272A0A1B0GTI8 110 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 ADAM10O14672 748 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 KCNAB3O43448 404 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 ALOX12BO75342 701 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 ZNF254O75437 659 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 CTAG2O75638 210 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 OR2J2O76002 312 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 OR2A4O95047 310 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 MT-ATP6P00846 226 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 GABRA1P14867 456 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 CPN1P15169 458 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 EMP2P54851 167 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 DEFA5Q01523 94 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 NKPD1Q17RQ9 610 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 MS4A18Q3C1V0 323 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 ELP2Q6IA86 826 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 SLC36A1Q7Z2H8 476 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 ZNF679Q8IYX0 411 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 PLPP5Q8NEB5 264 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 PHYHIPQ92561 330 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 PNPLA2Q96AD5 504 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 OR2A7Q96R45 310 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 EMC3Q9P0I2 261 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 WNT16Q9UBV4 365 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 GGT3PA6NGU5 568 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 NPIPA5E9PKD4 350 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 TOR1AO14656 332 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 XRCC3O43542 346 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 SULT1B1O43704 296 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
CTNS-201ENST00000046640 TLE3Q04726 772 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 ASPHD2Q6ICH7 369 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 DCXRQ7Z4W1 244 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 EID2Q8N6I1 236 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 OR10G3Q8NGC4 313 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 OR51A2Q8NGJ7 313 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 PCED1AQ9H1Q7 454 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 OCIAD1Q9NX40 245 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 NPIPA1Q9UND3 350 aa11.75□□□□□ -0.53
CTNS-201ENST00000046640 TMEM200CA6NKL6 621 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 FAM25EA8MYX2 175 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 H7C417 338 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 MASP2O00187 686 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 CFIP05156 583 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 PPP3CBP16298 524 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 GLO1Q04760 184 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 SPOCK1Q08629 439 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 PRAMEF20Q5VT98 475 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 CARD17Q5XLA6 110 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 RALGAPA1Q6GYQ0 2036 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 IGHV5-10-1A0A0J9YXX1 117 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 EFNA2O43921 213 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 CELA2AP08217 269 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 PRSS3P35030 304 aa11.74□□□□□ -0.53
CTNS-201ENST00000046640 SLC26A5P58743 744 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms