RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GUCY1A3Q02108 690 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 THSD4Q6ZMP0 1018 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 FKBP9P1Q75LS8 142 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 RRM2BQ7LG56 351 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 TREML1Q86YW5 311 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 HSH2DQ96JZ2 352 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 ZNF570Q96NI8 536 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 NDEL1Q9GZM8 345 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 POFUT1Q9H488 388 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 NTN4Q9HB63 628 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
ERCC1-201ENST00000013807 EMC7Q9NPA0 242 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 A8MXK9 166 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 H7C1C5 153 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 SURF4O15260 269 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 CCDC22O60826 627 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 FSTL3O95633 263 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 SERPINA1P01009 418 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 TNFSF4P23510 183 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 OMPP47874 163 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 HTR5AP47898 357 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 RGS6P49758 472 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 FXYD6P3P58550 94 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 LCN6P62502 163 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 HIST2H3PS2Q5TEC6 136 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 ADCK1Q86TW2 530 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 CYP4Z1Q86W10 505 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 GLB1L2Q8IW92 636 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 SPICQ8N5J4 248 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 ZDHHC22Q8N966 263 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 DEFB108BQ8NET1 73 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 ST7LQ8TDW4 575 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 POP5Q969H6 163 aaKnown RBP13.38□□□□□ -0.27
ERCC1-201ENST00000013807 ZMYND19Q96E35 227 aaPredicted RBP13.38□□□□□ -0.27
ERCC1-201ENST00000013807 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 DHRS1Q96LJ7 313 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 DCAF16Q9NXF7 216 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 PLEK2Q9NYT0 353 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 NDUFAF4Q9P032 175 aa13.38□□□□□ -0.27
ERCC1-201ENST00000013807 A0A1B0GWJ7 208 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 F5H0A9 414 aaPredicted RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 IFNL4K9M1U5 179 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 GSTA4O15217 222 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 KHDRBS3O75525 346 aaKnown RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 RHCEP18577 417 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 FPR2P25090 351 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 LCN2P80188 198 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 KRR1Q13601 381 aaKnown RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 DPY19L2P2Q6ZN68 376 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 KLHL36Q8N4N3 616 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 OR1F12Q8NHA8 337 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 GCDHQ92947 438 aaPredicted RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 CMBLQ96DG6 245 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 FAM46AQ96IP4 442 aaKnown RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 FUZQ9BT04 418 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 PLA2G12AQ9BZM1 189 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 SYT4Q9H2B2 425 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 ASH2LQ9UBL3 628 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 RPS6KA6Q9UK32 745 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 PPP1R3CQ9UQK1 317 aa13.37□□□□□ -0.27
ERCC1-201ENST00000013807 COA3Q9Y2R0 106 aaPredicted RBP13.37□□□□□ -0.27
ERCC1-201ENST00000013807 ISPDA4D126 451 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 TRAPPC2LH3BP13 241 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 SLC16A7O60669 478 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 SBK2P0C263 348 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 ZNF12P17014 697 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 BTG1P62324 171 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 ACTG1P63261 375 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 SLC27A4Q6P1M0 643 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 PGM2L1Q6PCE3 622 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 COLCA1Q6ZS62 124 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 OR5L1Q8NGL2 311 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 RASD2Q96D21 266 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 SLC6A7Q99884 636 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 GCM1Q9NP62 436 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 MMP26Q9NRE1 261 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 DCAF13Q9NV06 445 aaKnown RBP13.36□□□□□ -0.27
ERCC1-201ENST00000013807 ZNF446Q9NWS9 450 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 UBAP1Q9NZ09 502 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 EGFL7Q9UHF1 273 aa13.36□□□□□ -0.27
ERCC1-201ENST00000013807 TMEM178BH3BS89 294 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 IMPA2O14732 288 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 ARPC3O15145 178 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 PPIAL4GP0DN37 164 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 MDH2P40926 338 aaKnown RBP13.35□□□□□ -0.27
ERCC1-201ENST00000013807 CDKN2AP42771 156 aaKnown RBP13.35□□□□□ -0.27
ERCC1-201ENST00000013807 ZNF154Q13106 437 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 ZMYND11Q15326 602 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 ZNF181Q2M3W8 571 aa13.35□□□□□ -0.27
ERCC1-201ENST00000013807 RSPO1Q2MKA7 263 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms