RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Foxred1Q3TQB2 487 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Pdp1Q3UV70 538 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Fbxw16Q497Z0 464 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Bloc1s3Q5U5M8 195 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Olfr146Q60884 306 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 LcorQ6ZPI3 433 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Prss54Q7M756 383 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Gpatch2Q7TQC7 527 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 2810021J22RikQ8BIB6 539 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 March11Q8CBH7 400 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Olfr229Q8VFN5 307 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Olfr578Q8VH17 313 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Egln2Q91YE2 419 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Ccdc167Q9D162 97 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Fam122cQ9D5J5 180 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Pmepa1Q9D7R2 260 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Vmn1r40Q9EQ46 310 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 PrndQ9QUG3 179 aa16.6■□□□□ 0.25
Trim47-202ENSMUST00000106441 Sdk2Q6V4S5 2176 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Iglc4A0A0G2JEK5 104 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Gm13762A2ATG2 311 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Tmem74bA2AU34 232 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Vmn2r108E9PYS0 855 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Prps1l3G3UXL2 318 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 DhodhO35435 395 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Adh1P00329 375 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Gm1123Q1RME4 390 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Tex52Q3TTI8 308 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Fam71f1Q3UZD7 341 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Vmn1r196Q5SVD5 301 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Pla2g7Q60963 440 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 ZpbpQ62522 350 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Spin2cQ6NVE3 257 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 N6amt1Q6SKR2 214 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Serinc5Q8BHJ6 461 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Mettl2Q8BMK1 389 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Ikzf4Q8C208 586 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 GgactQ923B0 149 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Rps21Q9CQR2 83 aaKnown RBP16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Carhsp1Q9CR86 148 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Prps1Q9D7G0 318 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Stard5Q9EPQ7 213 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 HcstQ9QUJ0 79 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 MioxQ9QXN5 285 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 FaimQ9WUD8 179 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Efemp2Q9WVJ9 443 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Ccdc166S4R181 449 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 AtmQ62388 3066 aa16.59■□□□□ 0.25
Trim47-202ENSMUST00000106441 Tmem178bM0QWJ9 172 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 H2-T23P06339 357 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 EpxP49290 716 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Art5P70352 309 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Csn1s2aQ02862 184 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Prdm6Q3UZD5 596 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Olfr12Q60894 333 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 SynprQ8BGN8 265 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Cml2Q8CHQ9 238 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Rfwd3Q8CIK8 774 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 LiphQ8CIV3 451 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Cnppd1Q8K158 407 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Acy1Q99JW2 408 aa16.58■□□□□ 0.25
Trim47-202ENSMUST00000106441 Slc25a25A2ASZ8 469 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Fam71dD3YV92 440 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Gm5286E0CXI6 357 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Zfp945E9PYM8 794 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Vmn1r115K7N6Y3 295 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Gm20878L7N244 103 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Klf9O35739 244 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Rpl18P35980 188 aaKnown RBP16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Rps4xP62702 263 aaKnown RBP16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Gnb5P62881 395 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 AdmP97297 184 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Ndufb6Q3UIU2 128 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Nufip2Q5F2E7 692 aaKnown RBP16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Inca1Q6PKN7 231 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Arhgef4Q7TNR9 484 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Ttc29Q80VM3 471 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 P4htmQ8BG58 503 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Rxfp3Q8BGE9 472 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Inpp5kQ8C5L6 468 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Pars2Q8CFI5 475 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Scmh1Q8K214 706 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Ndufb2Q9CPU2 105 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Chmp1b2Q9CQD4 199 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Q9CQM1 111 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Slc6a19Q9D687 634 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 MyotQ9JIF9 496 aa16.58■□□□□ 0.24
Trim47-202ENSMUST00000106441 Ascc3E9PZJ8 2198 aaKnown RBP16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Olfr1338A2ACY7 313 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Rhox1B1APN4 224 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Znf296E9Q6W4 445 aaKnown RBP16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 AanatO88816 205 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Pcsk4P29121 655 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Capza1P47753 286 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 2410002F23RikQ3TE80 284 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Ap1s3Q7TN05 154 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 CenpxQ8C4X1 78 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 RybpQ8CCI5 228 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 Fam110cQ8VE94 421 aa16.57■□□□□ 0.24
Trim47-202ENSMUST00000106441 TardbpQ921F2 414 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms