RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Slc43a1Q8BSM7 564 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 MastlQ8C0P0 865 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Ctxn1Q8K129 82 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Sav1Q8VEB2 386 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr1143Q8VEU8 314 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 BlvrbQ923D2 206 aaKnown RBP13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Commd4Q9CQ02 199 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 DynapQ9D7M5 161 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Dok3Q9QZK7 444 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Minpp1Q9Z2L6 481 aa13.47□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Gm28897A0A087WP44 222 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Zfp352A2AML7 551 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr608E9Q564 316 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Prl4a1O35256 227 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Emc8O70378 207 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 ArhgdibQ61599 200 aaKnown RBP13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Dact2Q7TN08 757 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 B630019K06RikQ7TNS5 333 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Skida1Q80YR3 822 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 P2ry10bQ8BY68 352 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Mill2Q8HWE5 355 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Vmn1r85Q8VIB8 308 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 CsprsQ99388 208 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Nop16Q9CPT5 178 aaKnown RBP13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Tmem216Q9CQC4 141 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Dapl1Q9D757 107 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Vmn1r53Q9EP93 310 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Wrap73Q9JM98 462 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Actr10Q9QZB7 417 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Polg2Q9QZM2 459 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Fkbp1bQ9Z2I2 108 aa13.46□□□□□ -0.25
Ushbp1-201ENSMUST00000049184 Olfr419E9Q0Y7 313 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fbxw15L7N1X6 466 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dok2O70469 412 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mtnd4lP03903 98 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 GastP48757 101 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fabp2P55050 132 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Psg26Q4KL65 475 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 SrmsQ62270 496 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fbxo42Q6PDJ6 717 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr1222Q7TR02 311 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc22a20Q80UJ1 556 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Znf689Q8BKK5 500 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Znf436Q8BPP0 452 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cdk5rap1Q8BTW8 588 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc35e1Q8CD26 409 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Scamp1Q8K021 338 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Plekho2Q8K124 495 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Swsap1Q8VCI7 278 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Senp8Q9D2Z4 221 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc25a18Q9DB41 320 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dapp1Q9QXT1 280 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 NsdhlQ9R1J0 362 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 D7Ertd443eD2J0Y4 644 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r159K7N701 305 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Opn1mwO35599 359 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 AurkcO88445 282 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfp59P16373 634 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Rpl18P35980 188 aaKnown RBP13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 ActbP60710 375 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Actg1P63260 375 aaKnown RBP13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Garem1Q3UFT3 876 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mtcp1Q60945 107 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 SprQ64105 261 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mic13Q8R404 119 aaKnown RBP13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr1466Q8VFW4 310 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 SelenosQ9BCZ4 190 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fdx2Q9CPW2 174 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dgat2Q9DCV3 388 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cldn12Q9ET43 244 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tssc4Q9JHE7 317 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tas2r105Q9JKT4 300 aa13.45□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 A0A1L1SV24 88 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfp300A2AE21 645 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Obp1bA2AEP0 171 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm11756A2BEJ1 356 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm14743A2BHD2 171 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Pm20d2A3KG59 431 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm9047B9EJX3 177 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfp955bL7N232 545 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mrpl23O35972 146 aaKnown RBP13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 DgkaO88673 730 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Hbb-bh1P04444 147 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 GifP52787 417 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Stx4P70452 298 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Nhlrc4Q3UP44 136 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr1061Q7TR72 313 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Il17rcQ8K4C2 698 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr410Q8VFX7 315 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr402Q8VFX8 315 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Lrg1Q91XL1 342 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mettl18Q9CZ09 362 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Lcn9Q9D267 178 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc35a4Q9D321 324 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cdc40Q9DC48 579 aaKnown RBP13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tmem176aQ9DCS1 244 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cryba2Q9JJV1 197 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Nubp2Q9R061 275 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 March7Q9WV66 693 aa13.44□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dock11A2AF47 2073 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms