RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Nudt6Q8CH40 313 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 BicralQ8CHH5 1074 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Fahd1Q8R0F8 227 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Vmn1r42Q8VBS7 329 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Olfr970Q8VFN3 311 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Tinagl1Q99JR5 466 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 GpnmbQ99P91 574 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Metap1dQ9CPW9 335 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Tex33Q9D9J2 266 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Olfr934Q9EQ87 310 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Ramp2Q9WUP0 189 aa13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Ilf3Q9Z1X4 898 aaKnown RBP13.03□□□□□ -0.32
Ercc1-201ENSMUST00000003645 IsxA1A546 240 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Mtg2A2AFK4 405 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Rbm24D3Z4I3 236 aaKnown RBP13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 2010315B03RikJ3QK55 433 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 S1pr1O08530 382 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Pcdh12O55134 1180 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Crabp1P62965 137 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Gm7030Q0WXH6 285 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Bod1Q5SQY2 173 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Fzd8Q61091 685 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Znf260Q62513 407 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 C330021F23RikQ8C7T0 141 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Galnt6Q8C7U7 622 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Sf3b4Q8QZY9 424 aaKnown RBP13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Tmem234Q8R1E7 140 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr1497Q8VG11 314 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr686Q8VGX3 317 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Emc3Q99KI3 261 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Tmem216Q9CQC4 141 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 BlvraQ9CY64 295 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Sorcs2Q9EPR5 1159 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Bcl10Q9Z0H7 233 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Abca7Q91V24 2159 aa13.02□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Gm21865A0A087WRL2 222 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Zfp334A2A4U6 679 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Smurf2A2A5Z6 748 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Rhbdl2A2AGA4 302 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr173E9QAT7 321 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Gm3755K7N743 167 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Cops4O88544 406 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Nfatc1O88942 717 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Gm10881P01642 115 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Zfp27P10077 819 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 PrkcaP20444 672 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Rpl6P47911 296 aaKnown RBP13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Map2k6P70236 334 aaKnown RBP13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Hephl1Q3V1H3 1159 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Spata22Q5SV06 358 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Btn1a1Q62556 524 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Msrb2Q78J03 175 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr301Q7TS04 311 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Fbxl14Q8BID8 400 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 F830045P16RikQ8BJ95 487 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Rrnad1Q8BZG5 475 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 4933402N03RikQ8CDT9 329 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Vmn1r83Q8R287 306 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr1048Q8VGS2 320 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Rab40bQ8VHP8 278 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Pot1Q91WC1 640 aaKnown RBP13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 GmppaQ922H4 420 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Klhl22Q99JN2 634 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Phf19Q9CXG9 578 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 PacrgQ9DAK2 241 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Fgf20Q9ESL9 211 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Sorcs1Q9JLC4 1167 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 FryE9Q8I9 3020 aa13.01□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Trav6-7-dv9A0A075B639 125 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 2410004P03RikA0A087WQY2 205 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Igkv6-15A0A140T8M5 115 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Trav12-2A0N8N6 114 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr1193A2AV13 318 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Slco5a1E9PVD9 850 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Vmn1r152E9Q9N3 307 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Gm9772F6XPD8 135 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Trav13d-3J3QMG8 112 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Vmn2r47K7N709 852 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Vmn1r104L7N293 307 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Stc2O88452 296 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 ItgamP05555 1153 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Vax1Q2NKI2 338 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Tgtp2Q3T9E4 415 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Snta1Q61234 503 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Klk1b21Q61759 261 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Tgtp1Q62293 415 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Utf1Q6J1H4 339 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Ovch2Q7M761 609 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr1287Q7TQY1 305 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Olfr1087Q7TR63 313 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Kiaa1456Q80WQ4 447 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Cept1Q8BGS7 416 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Csnk1a1Q8BK63 337 aaKnown RBP13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Mblac1Q8BWY4 260 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Clic5Q8BXK9 251 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Tmem200aQ8C817 491 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Cox10Q8CFY5 443 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Klf11Q8K1S5 502 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Vmn1r183Q8K3N5 305 aa13□□□□□ -0.33
Ercc1-201ENSMUST00000003645 Tsen15Q8R3W5 168 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms