RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 LYNP07948 512 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 SPARCP09486 303 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 PATE4P0C8F1 98 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 CRHBPP24387 322 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 GRNP28799 593 aaKnown RBP10.74□□□□□ -0.69
LINC00339-213ENST00000642137 RPS27P42677 84 aaKnown RBP10.74□□□□□ -0.69
LINC00339-213ENST00000642137 HCCSP53701 268 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 PSG4Q00888 419 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 PIGFQ07326 219 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 EIF2B1Q14232 305 aaKnown RBP10.74□□□□□ -0.69
LINC00339-213ENST00000642137 PPA1Q15181 289 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 TAB1Q15750 504 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 GSG1Q2KHT4 349 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 C3orf36Q3SXR2 165 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 CCDC92Q53HC0 331 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-213ENST00000642137 C22orf34Q6ZV56 151 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 DCXRQ7Z4W1 244 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 LINC00346Q8IVM7 164 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 ALDH16A1Q8IZ83 802 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF786Q8N393 782 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 ACBD7Q8N6N7 88 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 OR52I1Q8NGK6 324 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 OR52N5Q8NH56 324 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 ASB17Q8WXJ9 295 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 MYDGFQ969H8 173 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 TMEM80Q96HE8 168 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 MYCBPQ99417 103 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-213ENST00000642137 ABHD6Q9BV23 337 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 JAM3Q9BX67 310 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 OR2H1Q9GZK4 316 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 DUSP21Q9H596 190 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 INPP5EQ9NRR6 644 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 CRNNQ9UBG3 495 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-213ENST00000642137 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 FBXL3Q9UKT7 428 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 BLOC1S6Q9UL45 172 aa10.74□□□□□ -0.69
LINC00339-213ENST00000642137 CACNA1CQ13936 2221 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 A0A1W2PR80 420 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 PTGES3LE9PB15 166 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 RER1O15258 196 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 SGCEO43556 437 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 RAB36O95755 333 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 IGHA1P01876 353 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 SERPINA5P05154 406 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 RNF224P0DH78 156 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 COX5BP10606 129 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 PSKH1P11801 424 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 ACTC1P68032 377 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 ACTA1P68133 377 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 TUBA1BP68363 451 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 TUBA4AP68366 448 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 SLC35A2P78381 396 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 PLP2Q04941 152 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 ST3GAL4Q11206 333 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 ELFN2Q5R3F8 820 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 KCTD18Q6PI47 426 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-213ENST00000642137 CORO6Q6QEF8 472 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 TUBA1AQ71U36 451 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 MDP1Q86V88 176 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 STX19Q8N4C7 294 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 LINC01560Q8TB33 94 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 ST7LQ8TDW4 575 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 SMAP2Q8WU79 429 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-213ENST00000642137 THEM6Q8WUY1 208 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 MAP6Q96JE9 813 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 DACH2Q96NX9 599 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 COPS4Q9BT78 406 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 WNT5BQ9H1J7 359 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 NGBQ9NPG2 151 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-213ENST00000642137 PLEK2Q9NYT0 353 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 DIMT1Q9UNQ2 313 aaKnown RBP10.73□□□□□ -0.69
LINC00339-213ENST00000642137 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 MYRFQ9Y2G1 1151 aa10.73□□□□□ -0.69
LINC00339-213ENST00000642137 IQCMA0A1B0GVH7 501 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 A0A1W2PQL4 384 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-213ENST00000642137 DAPL1A0PJW8 107 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 SYNGR3O43761 229 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 MRPS14O60783 128 aaKnown RBP10.72□□□□□ -0.69
LINC00339-213ENST00000642137 APOL3O95236 402 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 IGLV1-44P01699 117 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 CDK1P06493 297 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 THBDP07204 575 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 EGR3Q06889 387 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 ECH1Q13011 328 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 RAB39AQ14964 217 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 RAB35Q15286 201 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 PABPC1L2AQ5JQF8 200 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 RNLSQ5VYX0 342 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 CFAP77Q6ZQR2 320 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 AHSA2Q719I0 299 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 KCTD20Q7Z5Y7 419 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 ACBD4Q8NC06 268 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 IL17RDQ8NFM7 739 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 OR10H4Q8NGA5 316 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 AKR7LQ8NHP1 331 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms