RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ADGRL4Q9HBW9 690 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 PLSCR4Q9NRQ2 329 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 PLCXD1Q9NUJ7 323 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 PAK1IP1Q9NWT1 392 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 SCN3BQ9NY72 215 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 CNOT2Q9NZN8 540 aaKnown RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF629Q9UEG4 869 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 PSORS1C1Q9UIG5 152 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 BLOC1S6Q9UL45 172 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 TPRKBQ9Y3C4 175 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 COMMD3-BMI1R4GMX3 469 aa8.23□□□□□ -1.09
PHGDH-228ENST00000641847 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
PHGDH-228ENST00000641847 EFCAB10A6NFE3 127 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF99A8MXY4 864 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 EEF1E1-BLOC1S5C9J1V9 151 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 RPL36A-HNRNPH2H7BZ11 118 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 EEF1E1O43324 174 aaKnown RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 MPZL1O95297 269 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 TNFAIP8O95379 198 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 CNOT4O95628 575 aaKnown RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 TFP02787 698 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 SPARCP09486 303 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 PIPP12273 146 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 B4GALT1P15291 398 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 MSR1P21757 451 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 MPGP29372 298 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 ATP6V1E1P36543 226 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 SLC15A1P46059 708 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 GABARAPL2P60520 117 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 CSNK2BP67870 215 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 HSF2Q03933 536 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 RAB40BQ12829 278 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 KCTD21Q4G0X4 260 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 KLHL24Q6TFL4 600 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 Q6ZT83 130 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 FOXL2NBQ6ZUU3 175 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 TIGD4Q8IY51 512 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF610Q8N9Z0 462 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF540Q8NDQ6 660 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 SLC26A10Q8NG04 563 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 OR4F15Q8NGB8 312 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 OR52I1Q8NGK6 324 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 OR6N2Q8NGY6 317 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 IPCEF1Q8WWN9 437 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 C11orf40Q8WZ69 217 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 SGCDQ92629 289 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 HTRA1Q92743 480 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 GGHQ92820 318 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 NABP1Q96AH0 204 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 PERPQ96FX8 193 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 DACH2Q96NX9 599 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 NR1H4Q96RI1 486 aaPredicted RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 INTS14Q96SY0 518 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 CCL19Q99731 98 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 FOXB1Q99853 325 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 COPS4Q9BT78 406 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 YTHDF1Q9BYJ9 559 aaKnown RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 NELFAQ9H3P2 528 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 PIGMQ9H3S5 423 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 WDR76Q9H967 626 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 EMC7Q9NPA0 242 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 POLE4Q9NR33 117 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 TMEM38BQ9NVV0 291 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 FKBP14Q9NWM8 211 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 MRPL22Q9NWU5 206 aaKnown RBP8.22□□□□□ -1.09
PHGDH-228ENST00000641847 HAO2Q9NYQ3 351 aa8.22□□□□□ -1.09
PHGDH-228ENST00000641847 PTGES3LE9PB15 166 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 RAB36O95755 333 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 FADS2O95864 444 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 HRGP04196 525 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SCG5P05408 212 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ITGA5P08648 1049 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SBK2P0C263 348 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 PSKH1P11801 424 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF823P16415 610 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 NPR2P20594 1047 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 COX5AP20674 150 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 IGHV1-2P23083 117 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 EEF1B2P24534 225 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 RPS27P42677 84 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 GUCA1AP43080 201 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ENTPD1P49961 510 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 FOXG1P55316 489 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SH3BGRP55822 239 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ACTC1P68032 377 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ACTA1P68133 377 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SLC35A2P78381 396 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 MRPS34P82930 218 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ARF1P84077 181 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 PIGFQ07326 219 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SGCAQ16586 387 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 KLHL22Q53GT1 634 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF813Q6ZN06 617 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SLC16A9Q7RTY1 509 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 LUZP2Q86TE4 346 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SLC35F2Q8IXU6 374 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 GABRG1Q8N1C3 465 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 STX19Q8N4C7 294 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 RELL2Q8NC24 303 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms