RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PROK2Q9HC23 129 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 FANCFQ9NPI8 374 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 STEAP1Q9UHE8 339 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 B3GALT5Q9Y2C3 310 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 LRP12Q9Y561 859 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 CELSR3Q9NYQ7 3312 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 ECDO95905 644 aaPredicted RBP13.47□□□□□ -0.25
TRIM3-215ENST00000639856 WNT11O96014 354 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 CSRP1P21291 193 aaKnown RBP13.47□□□□□ -0.25
TRIM3-215ENST00000639856 CDK2P24941 298 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 CFPP27918 469 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 MNDAP41218 407 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 GZMKP49863 264 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 MRPS10P82664 201 aaKnown RBP13.47□□□□□ -0.25
TRIM3-215ENST00000639856 FMODQ06828 376 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 FAPQ12884 760 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF227Q86WZ6 799 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 ESX1Q8N693 406 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 FADS6Q8N9I5 356 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 ASCC1Q8N9N2 400 aaKnown RBP13.47□□□□□ -0.25
TRIM3-215ENST00000639856 FCAMRQ8WWV6 532 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 C5orf34Q96MH7 638 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM246Q9BRR3 403 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 PLSCR3Q9NRY6 295 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF275Q9NSD4 429 aaPredicted RBP13.47□□□□□ -0.25
TRIM3-215ENST00000639856 ALKBH4Q9NXW9 302 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 GTF2A1LQ9UNN4 478 aa13.47□□□□□ -0.25
TRIM3-215ENST00000639856 RIF1Q5UIP0 2472 aaKnown RBP13.47□□□□□ -0.25
TRIM3-215ENST00000639856 SPAARA0A1B0GVQ0 90 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 H0YC42 278 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
TRIM3-215ENST00000639856 KRT33AO76009 404 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 HPP00738 406 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF823P16415 610 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 AP3S2P59780 193 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 MFGE8Q08431 387 aaPredicted RBP13.46□□□□□ -0.25
TRIM3-215ENST00000639856 PCK2Q16822 640 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 MDGA2Q7Z553 956 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 CATSPERDQ86XM0 798 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 WDFY1Q8IWB7 410 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 C15orf40Q8WUR7 153 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 PPP1R14AQ96A00 147 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 MED28Q9H204 178 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 SH2D2AQ9NP31 389 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 HPF1Q9NWY4 346 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 MED29Q9NX70 200 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 RCE1Q9Y256 329 aa13.46□□□□□ -0.25
TRIM3-215ENST00000639856 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.26
TRIM3-215ENST00000639856 TPPPO94811 219 aa13.46□□□□□ -0.26
TRIM3-215ENST00000639856 SNTA1Q13424 505 aa13.46□□□□□ -0.26
TRIM3-215ENST00000639856 ARMC10Q8N2F6 343 aa13.46□□□□□ -0.26
TRIM3-215ENST00000639856 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.26
TRIM3-215ENST00000639856 KLK11Q9UBX7 282 aa13.46□□□□□ -0.26
TRIM3-215ENST00000639856 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.26
TRIM3-215ENST00000639856 A0A1W2PNV4 684 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 SRSF10O75494 262 aaKnown RBP13.45□□□□□ -0.26
TRIM3-215ENST00000639856 AQP8O94778 261 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 H2AFB2P0C5Z0 115 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 TAS2R20P59543 309 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 MYBPHQ13203 477 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 GLB1L2Q8IW92 636 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 OR56B4Q8NH76 319 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ST7LQ8TDW4 575 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 PAQR8Q8TEZ7 354 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 OR2M2Q96R28 347 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ACTR6Q9GZN1 396 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 HRASLSQ9HDD0 168 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 MRPL15Q9P015 296 aaKnown RBP13.45□□□□□ -0.26
TRIM3-215ENST00000639856 DHDHQ9UQ10 334 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 RPH3AQ9Y2J0 694 aaPredicted RBP13.45□□□□□ -0.26
TRIM3-215ENST00000639856 IGKV1D-43A0A0B4J1Z2 117 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 TTLL8A6PVC2 850 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ACOT7O00154 380 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 TNFRSF10AO00220 468 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 RAD1O60671 282 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 KHDRBS3O75525 346 aaKnown RBP13.45□□□□□ -0.26
TRIM3-215ENST00000639856 STOMP27105 288 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 CHAF1BQ13112 559 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 TNK1Q13470 666 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 FCN2Q15485 313 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ASPHD2Q6ICH7 369 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 C3orf33Q6P1S2 294 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 DCXRQ7Z4W1 244 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 GLRX5Q86SX6 157 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ZFAND1Q8TCF1 268 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ASB5Q8WWX0 329 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 JSRP1Q96MG2 331 aaPredicted RBP13.45□□□□□ -0.26
TRIM3-215ENST00000639856 GNRHR2Q96P88 292 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 ANGPTL4Q9BY76 406 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 R4GMQ9 66 aa13.45□□□□□ -0.26
TRIM3-215ENST00000639856 A0A0G2JMM0 328 aa13.44□□□□□ -0.26
TRIM3-215ENST00000639856 A0A1W2PPB8 328 aa13.44□□□□□ -0.26
TRIM3-215ENST00000639856 A0A1W2PRS3 328 aa13.44□□□□□ -0.26
TRIM3-215ENST00000639856 KIR3DP1A8MWS1 328 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms