RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ELMOD3Q96FG2 381 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 TIMD4Q96H15 378 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 C1orf159Q96HA4 380 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 C7orf34Q96L11 122 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 COG8Q96MW5 612 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 DIRC2Q96SL1 478 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 GPX7Q96SL4 187 aaPredicted RBP16.18■□□□□ 0.18
CLN6-221ENST00000637494 EGLN1Q9GZT9 426 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 NRIP3Q9NQ35 241 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 IER3IP1Q9Y5U9 82 aa16.18■□□□□ 0.18
CLN6-221ENST00000637494 TRBV4-1A0A0J9YWV2 114 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 CLDN25C9JDP6 229 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 PTP4A3O75365 173 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 ANPEPP15144 967 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 TUBG1P23258 451 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 MPV17P39210 176 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 LIMS1P48059 325 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 MNAT1P51948 309 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 AQP6Q13520 282 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 SMARCD3Q6STE5 483 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 USP51Q70EK9 711 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 GLB1L2Q8IW92 636 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 FAM86B1Q8N7N1 296 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 CDRT15Q96T59 188 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 SYT4Q9H2B2 425 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 TUBG2Q9NRH3 451 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 PLEK2Q9NYT0 353 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 IL20RAQ9UHF4 553 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 ZDHHC8Q9ULC8 765 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 TMCC3Q9ULS5 477 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 POLR1DQ9Y2S0 133 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 GRIP1Q9Y3R0 1128 aa16.17■□□□□ 0.18
CLN6-221ENST00000637494 SOCS2O14508 198 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 SPRY3O43610 288 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 TIMM8AO60220 97 aaPredicted RBP16.16■□□□□ 0.18
CLN6-221ENST00000637494 ICMTO60725 284 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 RP2O75695 350 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 FABP3P05413 133 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 CTLA4P16410 223 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 ZNF26P17031 533 aaPredicted RBP16.16■□□□□ 0.18
CLN6-221ENST00000637494 CRABP1P29762 137 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 CENPAP49450 140 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 LSM6P62312 80 aaKnown RBP16.16■□□□□ 0.18
CLN6-221ENST00000637494 MVKQ03426 396 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 SLC3A1Q07837 685 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 SPATS1Q496A3 300 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 PGM2L1Q6PCE3 622 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 RFPL4BQ6ZWI9 263 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 JAZF1Q86VZ6 243 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 FANK1Q8TC84 345 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 RAB1CQ92928 201 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 DHRS1Q96LJ7 313 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 TREM2Q9NZC2 230 aa16.16■□□□□ 0.18
CLN6-221ENST00000637494 VSX1Q9NZR4 365 aaPredicted RBP16.16■□□□□ 0.18
CLN6-221ENST00000637494 COA3Q9Y2R0 106 aaPredicted RBP16.16■□□□□ 0.18
CLN6-221ENST00000637494 RTTNQ86VV8 2226 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 OR10H3O60404 316 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 SLC6A6P31641 620 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 SEC23BQ15437 767 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 LIPNQ5VXI9 398 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 PEG10Q86TG7 708 aaKnown RBP16.15■□□□□ 0.18
CLN6-221ENST00000637494 OR51F2Q8NH61 342 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 RAB39BQ96DA2 213 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 ERMAPQ96PL5 475 aaPredicted RBP16.15■□□□□ 0.18
CLN6-221ENST00000637494 RACGAP1Q9H0H5 632 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 TBCCD1Q9NVR7 557 aa16.15■□□□□ 0.18
CLN6-221ENST00000637494 IMPA2O14732 288 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 ARPC2O15144 300 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 TXNDC12O95881 172 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 RENP00797 406 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 NGFP01138 241 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 IGHV1-46P01743 117 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 SCG5P05408 212 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 MSMBP08118 114 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 GAAP10253 952 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 TNFSF4P23510 183 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 NOS3P29474 1203 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 MMP15P51511 669 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 SCGB2A2Q13296 93 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 AVPI1Q5T686 147 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 THSD4Q6ZMP0 1018 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 RINLQ6ZS11 566 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 DEFB107AQ8IZN7 70 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 CCL17Q92583 94 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 GTF3AQ92664 365 aaKnown RBP16.14■□□□□ 0.17
CLN6-221ENST00000637494 TMEM186Q96B77 213 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 NUAK2Q9H093 628 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 LPAR2Q9HBW0 351 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 HIF1ANQ9NWT6 349 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 ASH2LQ9UBL3 628 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 MALRD1Q5VYJ5 2156 aa16.14■□□□□ 0.17
CLN6-221ENST00000637494 MSX2P35548 267 aaPredicted RBP16.13■□□□□ 0.17
CLN6-221ENST00000637494 GYS2P54840 703 aa16.13■□□□□ 0.17
CLN6-221ENST00000637494 RFX4Q33E94 735 aa16.13■□□□□ 0.17
CLN6-221ENST00000637494 MTX3Q5HYI7 312 aa16.13■□□□□ 0.17
CLN6-221ENST00000637494 ACSM5Q6NUN0 579 aa16.13■□□□□ 0.17
CLN6-221ENST00000637494 SHQ1Q6PI26 577 aaKnown RBP16.13■□□□□ 0.17
CLN6-221ENST00000637494 VASH1Q7L8A9 365 aaPredicted RBP16.13■□□□□ 0.17
CLN6-221ENST00000637494 PIGWQ7Z7B1 504 aa16.13■□□□□ 0.17
CLN6-221ENST00000637494 PHC2Q8IXK0 858 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms