RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 KIF25Q9UIL4 384 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 MAB21L2Q9Y586 359 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CACNA1GO43497 2377 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 PQLC2LA1A4F0 135 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 FAM74A7A6NL05 159 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 GRPRP30550 384 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 OR12D2P58182 307 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 E2F1Q01094 437 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 NTRK2Q16620 822 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 GSG1Q2KHT4 349 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 ZNF528Q3MIS6 628 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 FAM74A3Q4VXF1 159 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 RPTNQ6XPR3 784 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 OIT3Q8WWZ8 545 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 ADAD1Q96M93 576 aaKnown RBP10.35□□□□□ -0.75
CLN6-217ENST00000636964 PARD6GQ9BYG4 376 aaPredicted RBP10.35□□□□□ -0.75
CLN6-217ENST00000636964 BEX1Q9HBH7 125 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 SRA1Q9HD15 236 aaKnown RBP10.35□□□□□ -0.75
CLN6-217ENST00000636964 HIF3AQ9Y2N7 669 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 CACNA1HO95180 2353 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 SDK2Q58EX2 2172 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 C9J4A7 227 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 TFP02787 698 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 OPN1LWP04000 364 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 PCOLCEQ15113 449 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 C9orf152Q5JTZ5 239 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 KDM8Q8N371 416 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 FTMTQ8N4E7 242 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 FBXL2Q9UKC9 423 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 CD8B2A6NJW9 211 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 CDX4O14627 284 aaPredicted RBP10.35□□□□□ -0.75
CLN6-217ENST00000636964 SLC30A4O14863 429 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 FLRT2O43155 660 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 EEF1E1O43324 174 aaKnown RBP10.35□□□□□ -0.75
CLN6-217ENST00000636964 SELENOFO60613 162 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 TCRBP04435 133 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 CD14P08571 375 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 CD8BP10966 210 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 GABRA5P31644 462 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 INPP1P49441 399 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 ZNF85Q03923 595 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 OTPQ5XKR4 325 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 LUZP2Q86TE4 346 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 FJX1Q86VR8 437 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 CLRN3Q8NCR9 226 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 C4orf36Q96KX1 117 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 SFXN2Q96NB2 322 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 BABAM2Q9NXR7 383 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 PISDQ9UG56 409 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 NPTNQ9Y639 398 aa10.35□□□□□ -0.75
CLN6-217ENST00000636964 M0R233 179 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 GP1BAP07359 652 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 PRF1P14222 555 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 SPI1P17947 270 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 POLR2HP52434 150 aaKnown RBP10.34□□□□□ -0.75
CLN6-217ENST00000636964 RAB4BP61018 213 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 RAB11FIP2Q7L804 512 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 LRRC75AQ8NAA5 344 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 RASL10BQ96S79 203 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 CCNL2Q96S94 520 aaPredicted RBP10.34□□□□□ -0.75
CLN6-217ENST00000636964 DDOQ99489 341 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 METTL7AQ9H8H3 244 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 WDR54Q9H977 334 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 HS3ST3B1Q9Y662 390 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 TRAV36DV7A0A075B6V5 113 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 H7C2Y5 167 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 DCTN6O00399 190 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 GABRPO00591 440 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 ARPC3O15145 178 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 STK17BO94768 372 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 BGLAPP02818 100 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 CD59P13987 128 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 IL11P20809 199 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 GIFP27352 417 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 THBS2P35442 1172 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 TAGLN2P37802 199 aaKnown RBP10.34□□□□□ -0.75
CLN6-217ENST00000636964 C17orf67Q0P5P2 114 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 EIF2S3LQ2VIR3 472 aaKnown RBP10.34□□□□□ -0.75
CLN6-217ENST00000636964 TP53I3Q53FA7 332 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 PRAMEF20Q5VT98 475 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 FAM122BQ7Z309 247 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 OR5M1Q8NGP8 315 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 OR2T35Q8NGX2 323 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 TSPAN32Q96QS1 320 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 PTDSS2Q9BVG9 487 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 METTL17Q9H7H0 456 aaPredicted RBP10.34□□□□□ -0.75
CLN6-217ENST00000636964 TAS2R5Q9NYW4 299 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 PTTG3PQ9NZH4 202 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 GPR160Q9UJ42 338 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 ING1Q9UK53 422 aaPredicted RBP10.34□□□□□ -0.75
CLN6-217ENST00000636964 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 PCDHGA1Q9Y5H4 931 aa10.34□□□□□ -0.75
CLN6-217ENST00000636964 TRDV1A0A1B0GX56 115 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 VSTM5A8MXK1 200 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 FGF2P09038 288 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 CCKBRP32239 447 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ACVR1BP36896 505 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 OPCMLQ14982 345 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms