RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 KCNMB2Q9Y691 235 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 MRC1P22897 1456 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CDX4O14627 284 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NCR1O76036 304 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 HPP00738 406 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 FAM157BP0CG42 384 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC35E2P0CK97 266 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CEACAM3P40198 252 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 LGALS7P47929 136 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 DOC2BQ14184 412 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF385BQ569K4 471 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 GGNBP1Q5YKI7 109 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF620Q6ZNG0 422 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ISCA2Q86U28 154 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ANGPTL5Q86XS5 388 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 OR4F17Q8NGA8 305 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 OR4A4PQ8NGN8 299 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 OR1L1Q8NH94 360 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC29A1Q99808 456 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 PAAF1Q9BRP4 392 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CRISPLD2Q9H0B8 497 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM59LQ9UK28 342 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 FBXL4Q9UKA2 621 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 LOXL2Q9Y4K0 774 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 PCDHGA9Q9Y5G4 932 aaKnown RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 KPTNQ9Y664 436 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 USP3Q9Y6I4 520 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TDRD6O60522 2096 aaKnown RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TRPM6Q9BX84 2022 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 KIF13AQ9H1H9 1805 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SIRPB1O00241 398 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TNFSF11O14788 317 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 EIF4E2O60573 245 aaKnown RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CTNSO60931 367 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 DHODHQ02127 395 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ALKBH6Q3KRA9 238 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NCCRP1Q6ZVX7 275 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 FAM71CQ8NEG0 241 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ELSPBP1Q96BH3 223 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 FBXO17Q96EF6 278 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC22A12Q96S37 553 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 VPS25Q9BRG1 176 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 PLSCR3Q9NRY6 295 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SSSCA1O60232 199 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NRASP01111 189 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 GCGP01275 180 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF865P0CJ78 1059 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 HSF1Q00613 529 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 C1orf140Q5VVS0 124 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 MARCH3Q86UD3 253 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 IGDCC3Q8IVU1 814 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 DYNC2LI1Q8TCX1 351 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 RPEQ96AT9 228 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 LYSMD1Q96S90 227 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NKX1-2Q9UD57 310 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ADAMTS5Q9UNA0 930 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 MYADML2A6NDP7 307 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 G3V3Q6 166 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 DSCR3O14972 297 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 OR2C1O95371 312 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NID1P14543 1247 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 AOAHP28039 575 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC19A1P41440 591 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 HOXC5Q00444 222 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 PRTGQ2VWP7 1150 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 GLYATL3Q5SZD4 288 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF574Q6ZN55 896 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 EIF4E3Q8N5X7 224 aaKnown RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 GPR26Q8NDV2 337 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 LRRC15Q8TF66 581 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TSLPQ969D9 159 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM106AQ96A25 262 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TOX2Q96NM4 488 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NMNAT3Q96T66 252 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC25A21Q9BQT8 299 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC46A2Q9BY10 475 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TAS2R5Q9NYW4 299 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 RCE1Q9Y256 329 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NUP98P52948 1817 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CHRM2P08172 466 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 H2AFB1P0C5Y9 115 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CR2P20023 1033 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 USF1P22415 310 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 IVDP26440 423 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ABCD3P28288 659 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 CNN1P51911 297 aaKnown RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 GPR85P60893 370 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 GPR19Q15760 415 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 IAH1Q2TAA2 248 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 Q499Y3 187 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 STUMQ69YW2 141 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 DHRS7BQ6IAN0 325 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 LYPD4Q6UWN0 246 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF788Q6ZQV5 615 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 UBE3DQ7Z6J8 389 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 OR5M1Q8NGP8 315 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 ANGPTL6Q8NI99 470 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 SLC7A6Q92536 515 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 FCRL1Q96LA6 429 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms