RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 COQ3Q9NZJ6 369 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 LRRK2Q5S007 2527 aa12.73□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF587BE7ETH6 402 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 TBX1O43435 398 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 ENTPD6O75354 484 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 GPX5O75715 221 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CD8BP10966 210 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 GALP22466 123 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 PTBP1P26599 531 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CRYBB2P43320 205 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CENPAP49450 140 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 RORCP51449 518 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 ZNF91Q05481 1191 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 HIST3H3Q16695 136 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 TSTQ16762 297 aaKnown RBP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 C9orf135Q5VTT2 229 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 LUZP2Q86TE4 346 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 SNX18Q96RF0 628 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 RBM24Q9BX46 236 aaKnown RBP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 JAM3Q9BX67 310 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 HCAR1Q9BXC0 346 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 LINC00470Q9BZP3 86 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 OR51V1Q9H2C8 321 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 GPR35Q9HC97 309 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 AMBNQ9NP70 447 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 IGKV1D-43A0A0B4J1Z2 117 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 LOC100506127A0A0U1RQW1 187 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 FAM171A2A8MVW0 826 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 RGS13O14921 159 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 GYPBP06028 91 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CLUP10909 449 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CTLA4P16410 223 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CPEP16870 476 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CRABP1P29762 137 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 CHRNB4P30926 498 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 PYCR1P32322 319 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 TGFBR1P36897 503 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 RAB40BQ12829 278 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 MED22Q15528 200 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 KLHL12Q53G59 568 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 AGAP6Q5VW22 663 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 LINGO2Q7L985 606 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 ABHD12BQ7Z5M8 362 aaPredicted RBP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 OR6V1Q8N148 313 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 BBS1Q8NFJ9 593 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 OR51L1Q8NGJ5 315 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 HPS1Q92902 700 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 PTP4A1Q93096 173 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 FOXN4Q96NZ1 517 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 SDHCQ99643 169 aaPredicted RBP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 DNAJC27Q9NZQ0 273 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 H2AFY2Q9P0M6 372 aaPredicted RBP12.72□□□□□ -0.37
LINC00339-208ENST00000634934 MALT1Q9UDY8 824 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
LINC00339-208ENST00000634934 INTS1Q8N201 2190 aaKnown RBP12.71□□□□□ -0.38
LINC00339-208ENST00000634934 CLEC18AA5D8T8 446 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 DCTN6O00399 190 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 MSTNO14793 375 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 DHHO43323 396 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 KHDRBS3O75525 346 aaKnown RBP12.71□□□□□ -0.38
LINC00339-208ENST00000634934 AGFG2O95081 481 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 RAB36O95755 333 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 SPI1P17947 270 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 SLC25A1P53007 311 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 RPS7P62081 194 aaKnown RBP12.71□□□□□ -0.38
LINC00339-208ENST00000634934 ACSM1Q08AH1 577 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 TPBGQ13641 420 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 ETFDHQ16134 617 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 SLC25A47Q6Q0C1 308 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 CLEC18BQ6UXF7 455 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 Q6ZT83 130 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 RELL2Q8NC24 303 aaPredicted RBP12.71□□□□□ -0.38
LINC00339-208ENST00000634934 CLEC18CQ8NCF0 446 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 IL17RDQ8NFM7 739 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 ASB5Q8WWX0 329 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.38
LINC00339-208ENST00000634934 NMNAT2Q9BZQ4 307 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 COA3Q9Y2R0 106 aaPredicted RBP12.71□□□□□ -0.38
LINC00339-208ENST00000634934 FKBP7Q9Y680 259 aa12.71□□□□□ -0.38
LINC00339-208ENST00000634934 PCNX1Q96RV3 2341 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 A0A1W2PPL8 197 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 FAM90A27PA6NNH2 459 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 ZG16O60844 167 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 ADRA2AP08913 450 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 FGF9P31371 208 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 TNFSF8P32971 234 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF84P51523 738 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 FOXG1P55316 489 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 C10orf128Q5T292 105 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 CD200R1LQ6Q8B3 271 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms