RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 ST8SIA1Q92185 356 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 UFD1Q92890 307 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 MCUR1Q96AQ8 359 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CATSPER2Q96P56 530 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CNN2Q99439 309 aaKnown RBP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 RNF2Q99496 336 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CHP1Q99653 195 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CENPKQ9BS16 269 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 C19orf24Q9BVV8 132 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 ILKAPQ9H0C8 392 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 APOBEC3BQ9UH17 382 aaKnown RBP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 NIPBLQ6KC79 2804 aaeCLIP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 MTORP42345 2549 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 SPG11Q96JI7 2443 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 SMCO3A2RU48 225 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 C9JVG2 144 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 SLC16A4O15374 487 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZNF354AO60765 605 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZNF254O75437 659 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 LYPLA1O75608 230 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 TNFSF15O95150 251 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 OXSR1O95747 527 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 IGLL1P15814 213 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 IL2RGP31785 369 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 IFNA8P32881 189 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 ATP5OP48047 213 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 P2RY4P51582 365 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 LMO4P61968 165 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 RPS14P62263 151 aaKnown RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 BCL2L1Q07817 233 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 SCRN3Q0VDG4 424 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 DUSP7Q16829 419 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 XKR7Q5GH72 579 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 SPANXN2Q5MJ10 180 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 ATAD3CQ5T2N8 411 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 BAIAP2L2Q6UXY1 529 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 ACOT7LQ6ZUV0 252 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 MOB1BQ7L9L4 216 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 GTSCR1Q86UQ5 136 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 SLC25A45Q8N413 288 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 FTMTQ8N4E7 242 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 CATSPER1Q8NEC5 780 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR4C5Q8NGB2 326 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR52H1Q8NGJ2 320 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR56B4Q8NH76 319 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 FAM131CQ96AQ9 280 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 TMEM159Q96B96 161 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 GAL3ST1Q99999 423 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 SELENOIQ9C0D9 397 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 PPA2Q9H2U2 334 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 EXO5Q9H790 373 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 NEK6Q9HC98 313 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 PSMC3IPQ9P2W1 217 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 LSM7Q9UK45 103 aaKnown RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 CSAG2Q9Y5P2 127 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 U3KQA8 63 aa3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZFC3H1O60293 1989 aaKnown RBP3.81□□□□□ -1.8
TRAPPC9-216ENST00000634178 TDRD6O60522 2096 aaKnown RBP3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 A0A1W2PPE3 182 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 VSTM2BA6NLU5 285 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 TCP11X1B4DZS4 312 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 F8VP50 259 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 DYNC1I1O14576 645 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 ABCD4O14678 606 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 RNF13O43567 381 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 SERF1AO75920 110 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 HTR1FP30939 366 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 DDOSTP39656 456 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PTGDSP41222 190 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 SYKP43405 635 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PLP1P60201 277 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 GBE1Q04446 702 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR5I1Q13606 314 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 MICBQ29980 383 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 TMEM215Q68D42 235 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR52E8Q6IFG1 317 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 TFAP2EQ6VUC0 442 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 SPNS3Q6ZMD2 512 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 TPGS1Q6ZTW0 290 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PGAP1Q75T13 922 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PPP1R27Q86WC6 154 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 CCDC71LQ8N9Z2 235 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR13F1Q8NGS4 319 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 NAT6Q93015 286 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 HAVCR1Q96D42 359 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PAGE5Q96GU1 130 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PLEKHA8Q96JA3 519 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 RANBP9Q96S59 729 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 ATOH8Q96SQ7 321 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 FMO2Q99518 471 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PAXXQ9BUH6 204 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 FOLH1BQ9HBA9 442 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 PRSS16Q9NQE7 514 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 THUMPD1Q9NXG2 353 aaKnown RBP3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 SLC7A8Q9UHI5 535 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 KLHL21Q9UJP4 597 aa3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 NAP1L2Q9ULW6 460 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC9-216ENST00000634178 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms