RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ZNF229Q9UJW7 825 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 DEFB108AA8MXU0 73 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TNFSF13O75888 250 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 RCBTB2O95199 551 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 IL1AP01583 271 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CLPSP04118 112 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PSMA1P25786 263 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GALNSP34059 522 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MPIP34949 423 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CD79BP40259 229 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PTH2RP49190 550 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 EIF2B2P49770 351 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PRKAG1P54619 331 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 WNT4P56705 351 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 C1DQ13901 141 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GPAT3Q53EU6 434 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF311Q5JNZ3 666 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 SPANXN2Q5MJ10 180 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 AADACL4Q5VUY2 407 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 SLC27A4Q6P1M0 643 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 OR2L13Q8N349 312 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CLDN22Q8N7P3 220 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF615Q8N8J6 731 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 WDSUB1Q8N9V3 476 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 OR7G2Q8NG99 324 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 OR4Q3Q8NH05 313 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 SETD6Q8TBK2 473 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZPLD1Q8TCW7 415 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 SLC25A46Q96AG3 418 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TMCO6Q96DC7 493 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MS4A4EQ96PG1 132 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 G6PC2Q9NQR9 355 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TXNL4BQ9NX01 149 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 JKAMPQ9P055 326 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PPP4R1LQ9P1A2 415 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 VDAC3Q9Y277 283 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF780BQ9Y6R6 833 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MALRD1Q5VYJ5 2156 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MSTNO14793 375 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 DOK2O60496 412 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 OR5F1O95221 314 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 IFI6P09912 130 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 LIMS3P0CW19 117 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 LIMS4P0CW20 117 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PEPDP12955 493 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 IFNGR2P38484 337 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CDKN1AP38936 164 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 RORCP51449 518 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CTBP2P56545 445 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CLDN20P56880 219 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TAS2R41P59536 307 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 HGFACQ04756 655 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 FUT7Q11130 342 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ST3GAL3Q11203 375 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF155Q12901 538 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 BIKQ13323 160 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TNK1Q13470 666 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 KRR1Q13601 381 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 HABP2Q14520 560 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 LARS2Q15031 903 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TSC22D1Q15714 1073 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GLYR1Q49A26 553 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 KLHL22Q53GT1 634 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 LIPKQ5VXJ0 399 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TYW3Q6IPR3 259 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF620Q6ZNG0 422 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GATSQ8NAP1 163 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TOR1AIP2Q8NFQ8 470 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 OR4N2Q8NGD1 307 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TEX47Q8TBZ9 253 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GPR151Q8TDV0 419 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ACOT11Q8WXI4 607 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 STARD4Q96DR4 205 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 RNFT2Q96EX2 444 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 KCNS3Q9BQ31 491 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 SRRQ9GZT4 340 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MIXL1Q9H2W2 232 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 HEATR1Q9H583 2144 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CTPS2Q9NRF8 586 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MED17Q9NVC6 651 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 IL20Q9NYY1 176 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MAT2BQ9NZL9 334 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PAIP2BQ9ULR5 123 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PROCRQ9UNN8 238 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF443Q9Y2A4 671 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 EXOSC1Q9Y3B2 195 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PCNX3Q9H6A9 2034 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CPSF4LA6NMK7 179 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 J3QRE1 110 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SURF4O15260 269 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SSX4O60224 188 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PLOD3O60568 738 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 TMCC2O75069 709 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 LYPD3O95274 346 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 IGHA1P01876 353 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CPN1P15169 458 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 HK1P19367 917 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 FGF9P31371 208 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms