RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 RBMXP38159 391 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 CDKN2AP42771 156 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 PTDSS1P48651 473 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 SLC9A3P48764 834 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 DAP3P51398 398 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 CTXN1P60606 82 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 RAB1AP62820 205 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 ERVK-25P63136 954 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 HIST1H3AP68431 136 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 IL1RL1Q01638 556 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 NPRL3Q12980 569 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 TOP3AQ13472 1001 aaPredicted RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 TMEM249Q2WGJ8 235 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 KRTAP27-1Q3LI81 207 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 SPATS1Q496A3 300 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 SPRNQ5BIV9 151 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 SAMD4BQ5PRF9 694 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 HIST2H3PS2Q5TEC6 136 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 KRT80Q6KB66 452 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 ZNF620Q6ZNG0 422 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 HIST2H3AQ71DI3 136 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 HIST3H2AQ7L7L0 130 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 HDDC2Q7Z4H3 204 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 DPPA2Q7Z7J5 298 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 ADGRG5Q8IZF4 528 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 SVOPLQ8N434 492 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 ZNF540Q8NDQ6 660 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 LZICQ8WZA0 190 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 HIST1H2ACQ93077 130 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 MRPL24Q96A35 216 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 RSRC1Q96IZ7 334 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 ALG12Q9BV10 488 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 ZNF416Q9BWM5 594 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 PLA2G12AQ9BZM1 189 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 TMEM160Q9NX00 188 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 ADA2Q9NZK5 511 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 VSX1Q9NZR4 365 aaPredicted RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 ACTR3BQ9P1U1 418 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 STX18Q9P2W9 335 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 IL20RAQ9UHF4 553 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 SAMD4AQ9UPU9 718 aaKnown RBP6.53□□□□□ -1.36
TCF4-260ENST00000627685 FKBP7Q9Y680 259 aa6.53□□□□□ -1.36
TCF4-260ENST00000627685 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 TEX13CA0A0J9YWL9 993 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 LOC390937A0A1W2PQ73 354 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 PRSS37A4D1T9 235 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 BHLHE40O14503 412 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 NDUFAB1O14561 156 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 MPZL1O95297 269 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 OR8G3PP0DMU2 310 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 ZNF250P15622 560 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 FPR3P25089 353 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 APEX1P27695 318 aaKnown RBP6.52□□□□□ -1.37
TCF4-260ENST00000627685 LAP3P28838 519 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 RRM2P31350 389 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 IFNA8P32881 189 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 PDLIM4P50479 330 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 ERFP50548 548 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 PSG4Q00888 419 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 RIN1Q13671 783 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 MAD2L1BPQ15013 274 aaPredicted RBP6.52□□□□□ -1.37
TCF4-260ENST00000627685 TAF11Q15544 211 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 RSPO1Q2MKA7 263 aaPredicted RBP6.52□□□□□ -1.37
TCF4-260ENST00000627685 ANKDD1AQ495B1 522 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 ZBED5Q49AG3 693 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 ELFN2Q5R3F8 820 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 FAM27BQ5VT28 67 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 C1orf94Q6P1W5 598 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 ZNF730Q6ZMV8 503 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 TMEM179BQ7Z7N9 219 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 OAFQ86UD1 273 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 HIPK1Q86Z02 1210 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 OR9Q2Q8NGE9 314 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.37
TCF4-260ENST00000627685 SLCO4A1Q96BD0 722 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 TSSK2Q96PF2 358 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 FNDC11Q9BVV2 318 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 RACGAP1Q9H0H5 632 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 RAB1BQ9H0U4 201 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 EMC7Q9NPA0 242 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 PNRC2Q9NPJ4 139 aaKnown RBP6.52□□□□□ -1.37
TCF4-260ENST00000627685 POLE4Q9NR33 117 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 FBLN5Q9UBX5 448 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 RPS6KA6Q9UK32 745 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 CMAHPQ9Y471 501 aa6.52□□□□□ -1.37
TCF4-260ENST00000627685 FBN1P35555 2871 aaKnown RBP6.51□□□□□ -1.37
TCF4-260ENST00000627685 A0A1W2PRG6 482 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 C5orf63A6NC05 138 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 OR6C6A6NF89 314 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 A8MV72 311 aaPredicted RBP6.51□□□□□ -1.37
TCF4-260ENST00000627685 WNT9BO14905 357 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 ARPC3O15145 178 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 TBX1O43435 398 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 PPP1R3DO95685 299 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 RAB36O95755 333 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 CLPTM1O96005 669 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 CST2P09228 141 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 IGHV4-31P0DP07 118 aa6.51□□□□□ -1.37
TCF4-260ENST00000627685 SAGP10523 405 aaPredicted RBP6.51□□□□□ -1.37
TCF4-260ENST00000627685 CD79AP11912 226 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms