RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 B3GLCTQ6Y288 498 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 MEPCEQ7L2J0 689 aaKnown RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 SHFQ7M4L6 423 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 ADCK1Q86TW2 530 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 UEVLDQ8IX04 471 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 SPARTQ8N0X7 666 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 PIAS4Q8N2W9 510 aaPredicted RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 OR52I1Q8NGK6 324 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 LGALS12Q96DT0 336 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 TSSK2Q96PF2 358 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 SNX18Q96RF0 628 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 MOV10Q9HCE1 1003 aaKnown RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 RPRD1BQ9NQG5 326 aaKnown RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 MRPS18AQ9NVS2 196 aaKnown RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 NOX1Q9Y5S8 564 aa11.03□□□□□ -0.64
PNKP-217ENST00000625216 RAI1Q7Z5J4 1906 aaPredicted RBP11.03□□□□□ -0.64
PNKP-217ENST00000625216 ALPK2Q86TB3 2170 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 PRSS37A4D1T9 235 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 M0R1B8 84 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 DCTN6O00399 190 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 AKAP8O43823 692 aaKnown RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 TRMUO75648 421 aaKnown RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 BCL10O95999 233 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 CLPTM1O96005 669 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 RENP00797 406 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 PCMT1P22061 227 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 GSTT1P30711 240 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 PYCR1P32322 319 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 MAP2K4P45985 399 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 MTNR1AP48039 350 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 SELENOPP49908 381 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 SH3BGRP55822 239 aaPredicted RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 ST3GAL4Q11206 333 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 C1DQ13901 141 aaKnown RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 IRF3Q14653 427 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 C9orf135Q5VTT2 229 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 FAM205BPQ63HN1 556 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 PRSS48Q7RTY5 328 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 STX19Q8N4C7 294 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 OR51L1Q8NGJ5 315 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 RFKQ969G6 155 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 DHRS9Q9BPW9 319 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 EMC6Q9BV81 110 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 CCDC90BQ9GZT6 254 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 SYT4Q9H2B2 425 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 BARX1Q9HBU1 254 aaPredicted RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 VSX1Q9NZR4 365 aaPredicted RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 H2AFY2Q9P0M6 372 aaPredicted RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 WARS2Q9UGM6 360 aaKnown RBP11.02□□□□□ -0.65
PNKP-217ENST00000625216 POU2F3Q9UKI9 436 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.65
PNKP-217ENST00000625216 USF3Q68DE3 2245 aa11.02□□□□□ -0.65
PNKP-217ENST00000625216 CADP27708 2225 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 A0A1W2PR80 420 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 SLC22A23A1A5C7 686 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 TRIM64BA6NI03 449 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 A6NIZ1 184 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 SLC22A31A6NKX4 558 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 E7EQL1 145 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 RPL36A-HNRNPH2H7BZ11 118 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 XKRYO14609 159 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 MRPS14O60783 128 aaKnown RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 SLC43A1O75387 559 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 ZNF432O94892 652 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 FADS2O95864 444 aaKnown RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 CD8AP01732 235 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 HEXAP06865 529 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 C21orf33P30042 268 aaPredicted RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 TTKP33981 857 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 ALDH3B2P48448 385 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 CLDN17P56750 224 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 RAP1BP61224 184 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 RPS7P62081 194 aaKnown RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 RAP1AP62834 184 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 LINC01590Q5TEZ4 76 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 XAF1Q6GPH4 301 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 ZNF544Q6NX49 715 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 ANKRD16Q6P6B7 361 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 LYPD4Q6UWN0 246 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 KCTD8Q6ZWB6 473 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 FBXL14Q8N1E6 418 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 NOXO1Q8NFA2 376 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 OR4F15Q8NGB8 312 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 OR51G2Q8NGK0 314 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 OR1K1Q8NGR3 316 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 MYDGFQ969H8 173 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 POM121Q96HA1 1249 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 TEAD3Q99594 435 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 SMR3AQ99954 134 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 C1QTNF6Q9BXI9 259 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 FGF20Q9NP95 211 aaPredicted RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 CBLN4Q9NTU7 201 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 EXOGQ9Y2C4 368 aaKnown RBP11.01□□□□□ -0.65
PNKP-217ENST00000625216 SNX5Q9Y5X3 404 aa11.01□□□□□ -0.65
PNKP-217ENST00000625216 COMMD3-BMI1R4GMX3 469 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms