RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 MTCP1P56278 107 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PCBD1P61457 104 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 S100A7AQ86SG5 101 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ZNF611Q8N823 705 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 KLHDC7BQ96G42 594 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ZMAT3Q9HA38 289 aaKnown RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 ZNF331Q9NQX6 463 aaPredicted RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 KLK11Q9UBX7 282 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 A0A1W2PP55 124 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 DMWDQ09019 674 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 PCK2Q16822 640 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 ZNF511Q8NB15 262 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SMIM14Q96QK8 99 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 ISG20L2Q9H9L3 353 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 FLVCR1Q9Y5Y0 555 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 FITM1A5D6W6 292 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 G3V3Q6 166 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 GFYI3L273 518 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 NOVA1P51513 510 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 GPM6BQ13491 265 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 C8orf82Q6P1X6 216 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 MOB3CQ70IA8 216 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CAMKMTQ7Z624 323 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CAPNS2Q96L46 248 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SLC22A12Q96S37 553 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 NXF5Q9H1B4 397 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 NINQ8N4C6 2090 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 COL22A1Q8NFW1 1626 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 LILRB3O75022 631 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 PTGER1P34995 402 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 RAB38P57729 211 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CST6Q15828 149 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 PSMF1Q92530 271 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CORO2AQ92828 525 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 C19orf43Q9BQ61 176 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 VN1R3Q9BXE9 311 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 TM7SF3Q9NS93 570 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 KCMF1Q9P0J7 381 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 DBHP09172 617 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 NPPBP16860 134 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 ACKR3P25106 362 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SLC35A1P78382 337 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 MZT1Q08AG7 82 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 NSDHLQ15738 373 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 ZNF429Q86V71 674 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 MISPQ8IVT2 679 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SECTM1Q8WVN6 248 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 LMAN1LQ9HAT1 526 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SLC35D1Q9NTN3 355 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 FOXJ3Q9UPW0 622 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CCDC163A0A0D9SF12 145 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 PLPP2O43688 288 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 SLC2A10O95528 541 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 MT-ATP6P00846 226 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 GNB3P16520 340 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 OR1D4P47884 311 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 RBP2P50120 134 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 HNRNPA3P51991 378 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 CDK5Q00535 292 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 TMEM128Q5BJH2 165 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 VRK3Q8IV63 474 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 TECTBQ96PL2 329 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 OR5B2Q96R09 309 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CLSTN3Q9BQT9 956 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 ULBP3Q9BZM4 244 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 TAS2R4Q9NYW5 299 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CGGBP1Q9UFW8 167 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 COL18A1P39060 1754 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 A6NLC8 198 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CLDN1O95832 211 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 MMP7P09237 267 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 DUSP8Q13202 625 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 ZNF595Q8IYB9 648 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 TEX101Q9BY14 249 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 DDX60LQ5H9U9 1706 aaKnown RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 LRP3O75074 770 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 GLSO94925 669 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 HNRNPA1P09651 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
VCL-206ENST00000623461 TMEM183BQ1AE95 376 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 LGALSLQ3ZCW2 172 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 TMEM65Q6PI78 240 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 GRASPQ7Z6J2 395 aaPredicted RBP8.16□□□□□ -1.1
VCL-206ENST00000623461 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 RXFP4Q8TDU9 374 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 MOB1AQ9H8S9 216 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 DNAJB11Q9UBS4 358 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 PCDHGA1Q9Y5H4 931 aa8.16□□□□□ -1.1
VCL-206ENST00000623461 CCKARP32238 428 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 ZNF787Q6DD87 383 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 TRILQ7L0X0 811 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 TMEM25Q86YD3 366 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 DND1Q8IYX4 353 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms