RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	RNF141	Q8WVD5	230 aa		12.99	□□□□□ -0.33
SYNRG-231	ENST00000622045	PATE1	Q8WXA2	126 aa		12.99	□□□□□ -0.33
SYNRG-231	ENST00000622045	PIK3IP1	Q96FE7	263 aa		12.99	□□□□□ -0.33
SYNRG-231	ENST00000622045	PARP12	Q9H0J9	701 aa	Known RBP	12.99	□□□□□ -0.33
SYNRG-231	ENST00000622045	C1orf198	Q9H425	327 aa		12.99	□□□□□ -0.33
SYNRG-231	ENST00000622045	PRR13	Q9NZ81	148 aa		12.99	□□□□□ -0.33
SYNRG-231	ENST00000622045	UNC80	Q8N2C7	3258 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	TMEM235	A6NFC5	223 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	HTR3B	O95264	441 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	SLC25A4	P12235	298 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	CD96	P40200	585 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	ERV3-1	Q14264	604 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	EXOSC6	Q5RKV6	272 aa	Known RBP	12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR2G2	Q8NGZ5	317 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	SEC11C	Q9BY50	192 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	PILRA	Q9UKJ1	303 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045		A6NLC8	198 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	CD14	P08571	375 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	SLC35E2	P0CK97	266 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	NME2	P22392	152 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR2B8P	P59922	312 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	ACTB	P60709	375 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	ACTG1	P63261	375 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	VWA2	Q5GFL6	755 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	LINC01590	Q5TEZ4	76 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	ZNF585A	Q6P3V2	769 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	DNM1P46	Q6ZS02	220 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	CA13	Q8N1Q1	262 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR13C8	Q8NGS7	320 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	GPX8	Q8TED1	209 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR51M1	Q9H341	326 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	DCDC2B	A2VCK2	349 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	C5orf52	A6NGY3	159 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	DCTN6	O00399	190 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	SNRNP70	P08621	437 aa	Known RBP	12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	S100P	P25815	95 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	PJVK	Q0ZLH3	352 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	TSC22D1	Q15714	1073 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	SLC22A6	Q4U2R8	563 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR52W1	Q6IF63	320 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	OOSP2	Q86WS3	158 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	BHLHE23	Q8NDY6	225 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	PAPOLG	Q9BWT3	736 aa	Known RBP	12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	ALX4	Q9H161	411 aa	Predicted RBP	12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	DTX4	Q9Y2E6	619 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	PCDHGA1	Q9Y5H4	931 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	CHD7	Q9P2D1	2997 aa		12.98	□□□□□ -0.33
SYNRG-231	ENST00000622045	SERINC4	A6NH21	518 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	FGF16	O43320	207 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	SERPINA5	P05154	406 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	FOSL1	P15407	271 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	MAP3K8	P41279	467 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	TDG	Q13569	410 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	RRNAD1	Q96FB5	475 aa	Known RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	G6PC3	Q9BUM1	346 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	ACKR4	Q9NPB9	350 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	RCC2	Q9P258	522 aa	Known RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	SLC22A13	Q9Y226	551 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	hCG_1809904	A0A1W2PP81	198 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045		A0A1W2PR64	198 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045		A0A1W2PRV1	198 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	MOGAT2	Q3SYC2	334 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	FOXRED2	Q8IWF2	684 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	ACBD4	Q8NC06	268 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	CMKLR1	Q99788	373 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	CHRD	Q9H2X0	955 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	WDR76	Q9H967	626 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	CHMP1A	Q9HD42	196 aa	Predicted RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	SMCO4	Q9NRQ5	59 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045		A0A0A6YYC8	382 aa	Predicted RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045		C9JQL5	133 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045		I3L1I5	382 aa	Predicted RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	TMEM127	O75204	238 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR6A2	O95222	327 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	LSS	P48449	732 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	NCMAP	Q5T1S8	102 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	SLC35D2	Q76EJ3	337 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	ADAD2	Q8NCV1	583 aa	Known RBP	12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	ZNF563	Q8TA94	476 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	HIST1H2BA	Q96A08	127 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	AKR1E2	Q96JD6	320 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	ARL5B	Q96KC2	179 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	PFDN5	Q99471	154 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	NMNAT2	Q9BZQ4	307 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	MMP26	Q9NRE1	261 aa		12.97	□□□□□ -0.33
SYNRG-231	ENST00000622045	OR4C45	A6NMZ5	311 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	REN	P00797	406 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	CD79A	P11912	226 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	CD1C	P29017	333 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	SERPINF1	P36955	418 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	FAM76B	Q5HYJ3	339 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	LINC00114	Q6XXX2	140 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	SKA3	Q8IX90	412 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	GVQW1	Q8N7I0	195 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	CTHRC1	Q96CG8	243 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	MOGAT1	Q96PD6	335 aa		12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	ELF4	Q99607	663 aa	Predicted RBP	12.96	□□□□□ -0.33
SYNRG-231	ENST00000622045	SYT4	Q9H2B2	425 aa		12.96	□□□□□ -0.33

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