RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 NUP37Q8NFH4 326 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 IL17RDQ8NFM7 739 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 GRIP2Q9C0E4 1043 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 RIBC2Q9H4K1 309 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CA10Q9NS85 328 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 ENOPH1Q9UHY7 261 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 POU2F3Q9UKI9 436 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 PRR23D1E9PI22 279 aaPredicted RBP12.36□□□□□ -0.43
CBWD3-217ENST00000621474 GPRIN2O60269 458 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 RAF1P04049 648 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 PRR23D2P0DMB1 279 aaPredicted RBP12.36□□□□□ -0.43
CBWD3-217ENST00000621474 NR4A1P22736 598 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 STOMP27105 288 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 SCRN3Q0VDG4 424 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 PCK2Q16822 640 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 KRT80Q6KB66 452 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 CFAP77Q6ZQR2 320 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 BCDIN3DQ7Z5W3 292 aaKnown RBP12.36□□□□□ -0.43
CBWD3-217ENST00000621474 DTX2Q86UW9 622 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 ZNF101Q8IZC7 436 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 OR6K6Q8NGW6 343 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 SMAP2Q8WU79 429 aaPredicted RBP12.36□□□□□ -0.43
CBWD3-217ENST00000621474 NINJ1Q92982 152 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 EME1Q96AY2 570 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 MBOAT4Q96T53 435 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 DHRS9Q9BPW9 319 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 MARCH7Q9H992 704 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 PNRC2Q9NPJ4 139 aaKnown RBP12.36□□□□□ -0.43
CBWD3-217ENST00000621474 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
CBWD3-217ENST00000621474 IQCMA0A1B0GVH7 501 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 OR6C6A6NF89 314 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 SGCEO43556 437 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 DOK2O60496 412 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 GLCEO94923 617 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 HLA-DQA2P01906 255 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 PEX2P28328 305 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 TTKP33981 857 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 WNT5AP41221 380 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 ADAM8P78325 824 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 PLP2Q04941 152 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 ADIPOQQ15848 244 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 ZIK1Q3SY52 487 aaPredicted RBP12.35□□□□□ -0.43
CBWD3-217ENST00000621474 LPCAT4Q643R3 524 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 C11orf71Q6IPW1 123 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 ZBTB49Q6ZSB9 765 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 CXXC5Q7LFL8 322 aaKnown RBP12.35□□□□□ -0.43
CBWD3-217ENST00000621474 DEPDC4Q8N2C3 294 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 OR10S1Q8NGN2 331 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 SLC7A6Q92536 515 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 MAP6Q96JE9 813 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 KCNS3Q9BQ31 491 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 OR51V1Q9H2C8 321 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 C1orf198Q9H425 327 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
CBWD3-217ENST00000621474 LAMP3Q9UQV4 416 aa12.35□□□□□ -0.43
CBWD3-217ENST00000621474 CCDC182A6NF36 153 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 CASQ2O14958 399 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 PRODHO43272 600 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 ICMTO60725 284 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 PAICSP22234 425 aaKnown RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 SNTB2Q13425 540 aaKnown RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 KEAP1Q14145 624 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 LRRC36Q1X8D7 754 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 TBC1D28Q2M2D7 210 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 ZNF544Q6NX49 715 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 TIGD4Q8IY51 512 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 MUC15Q8N387 334 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 TCEANCQ8N8B7 351 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 OR4F15Q8NGB8 312 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 OTULINQ96BN8 352 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 HRASLS5Q96KN8 279 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 CCL19Q99731 98 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 TOR3AQ9H497 397 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 PLEK2Q9NYT0 353 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 POLR1DQ9Y2S0 133 aa12.34□□□□□ -0.43
CBWD3-217ENST00000621474 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
CBWD3-217ENST00000621474 CREBBPQ92793 2442 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 C5orf49A4QMS7 147 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 OVOL3O00110 214 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 TLX2O43763 284 aaPredicted RBP12.33□□□□□ -0.43
CBWD3-217ENST00000621474 PTHP01270 115 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 DBHP09172 617 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 COX5BP10606 129 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 FMO3P31513 532 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 APOBEC3AP31941 199 aaPredicted RBP12.33□□□□□ -0.43
CBWD3-217ENST00000621474 APLNRP35414 380 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 THBS4P35443 961 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 ENTPD1P49961 510 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 ERVS71-1P61550 626 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 RAB35Q15286 201 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 TRIP10Q15642 601 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 TEX30Q5JUR7 227 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms