RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 OR4C45A6NMZ5 311 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 TAAR5O14804 337 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 ITGA5P08648 1049 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 ACKR3P25106 362 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 CD80P33681 288 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 BCL6P41182 706 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 ARRB1P49407 418 aaPredicted RBP9.77□□□□□ -0.85
UPF3A-212ENST00000619079 TAS2R31P59538 309 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 RNASE10Q5GAN6 216 aaKnown RBP9.77□□□□□ -0.85
UPF3A-212ENST00000619079 DNLZQ5SXM8 178 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 FIGNL1Q6PIW4 674 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 ADAD1Q96M93 576 aaKnown RBP9.77□□□□□ -0.85
UPF3A-212ENST00000619079 MESP1Q9BRJ9 268 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 MKKSQ9NPJ1 570 aaPredicted RBP9.77□□□□□ -0.85
UPF3A-212ENST00000619079 DUSP22Q9NRW4 184 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 MRM2Q9UI43 246 aaKnown RBP9.77□□□□□ -0.85
UPF3A-212ENST00000619079 VSIG4Q9Y279 399 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 FARSAQ9Y285 508 aaKnown RBP9.77□□□□□ -0.85
UPF3A-212ENST00000619079 NCOR1O75376 2440 aa9.77□□□□□ -0.85
UPF3A-212ENST00000619079 A6NLC8 198 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 DBX1A6NMT0 343 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 FAM157AC9JC47 383 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 GPR37O15354 613 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 DOK2O60496 412 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 MED6O75586 246 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 APODP05090 189 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 PET100P0DJ07 73 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 GRPRP30550 384 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 SKP1P63208 163 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 RHEBQ15382 184 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ALG10BQ5I7T1 473 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 PHF19Q5T6S3 580 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF627Q7L945 461 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 COMMD1Q8N668 190 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 COX18Q8N8Q8 333 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 OR2G2Q8NGZ5 317 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 NUBPLQ8TB37 319 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF587Q96SQ5 575 aaPredicted RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 SLC6A7Q99884 636 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ADAP2Q9NPF8 381 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 WSB2Q9NYS7 404 aaPredicted RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 MRPS17Q9Y2R5 130 aaKnown RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 F5P12259 2224 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 IGKV1-8A0A0C4DH67 115 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 TMEM72A0PK05 275 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 C7orf77A4D0Y5 90 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 PRR32B1ATL7 298 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 C4orf51C9J302 202 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 K7ESM1 405 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 PEX12O00623 359 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ALOX12BO75342 701 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 KAT7O95251 611 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ABHD16AO95870 558 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 SLC2A1P11166 492 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 VAMP1P23763 118 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 RABIFP47224 123 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 SLC25A1P53007 311 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 CD81P60033 236 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 SNRPNP63162 240 aaKnown RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 DPTQ07507 201 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF239Q16600 458 aaKnown RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 LBHQ53QV2 105 aaPredicted RBP9.76□□□□□ -0.85
UPF3A-212ENST00000619079 AWAT1Q58HT5 328 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 LINC01590Q5TEZ4 76 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 KCTD9Q7L273 389 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 BIVMQ86UB2 503 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ETFBKMTQ8IXQ9 262 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 ZNRF4Q8WWF5 429 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 COL26A1Q96A83 441 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 AKR1E2Q96JD6 320 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 STACQ99469 402 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
UPF3A-212ENST00000619079 NUDT21O43809 227 aaKnown RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 IFNA10P01566 189 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 SLC35G4P0C7Q5 338 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 LYL1P12980 280 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ITGA3P26006 1051 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ADH6P28332 368 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 GSK3AP49840 483 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RBP2P50120 134 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 SULT1A2P50226 295 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RIDAP52758 137 aaKnown RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RAB4BP61018 213 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 EGR3Q06889 387 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 GAB4Q2WGN9 574 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 PRRT3Q5FWE3 981 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 FAM166AQ6J272 317 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 PRSS54Q6PEW0 395 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 BTNL8Q6UX41 500 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 HIST2H3AQ71DI3 136 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 PARS2Q7L3T8 475 aaKnown RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 CDRT4Q8N9R6 151 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 LINC01555Q8NAE3 123 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ZSCAN4Q8NAM6 433 aaPredicted RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 TSEN15Q8WW01 171 aaKnown RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ASB17Q8WXJ9 295 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms