RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ANKRD30BLA7E2S9 258 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 SCGNO76038 276 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 PET100P0DJ07 73 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 BLVRBP30043 206 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 GPR3P46089 330 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 BDH1Q02338 343 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 EGR3Q06889 387 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 MEF2DQ14814 521 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 VSTM2LQ96N03 204 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 PADI1Q9ULC6 663 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 PATE3B3GLJ2 98 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 AGPAT2O15120 278 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 EFEMP2O95967 443 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF806P0C7X5 589 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 SEC61A1P61619 476 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 CCDC54Q8NEL0 328 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 SLC7A6Q92536 515 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 C1QTNF6Q9BXI9 259 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 METTL9Q9H1A3 318 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 OR14J1Q9UGF5 321 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 V9GYH0 126 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 UNC80Q8N2C7 3258 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNHIT1O43257 154 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 CDC20Q12834 499 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 ZSCAN1Q8NBB4 408 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 OR1M1Q8NGA1 313 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 PAQR8Q8TEZ7 354 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 PSD2Q9BQI7 771 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 R4GMQ9 66 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 LOC102725191A0A1B0GVB3 256 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 FOXS1O43638 330 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 GUSBP08236 651 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 NAGAP17050 411 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 ATF1P18846 271 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 IL11P20809 199 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 CLDN20P56880 219 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 FAPQ12884 760 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 GNMTQ14749 295 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF141Q15928 474 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 BCL2A1Q16548 175 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 GPR155Q7Z3F1 870 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 RPS19BP1Q86WX3 136 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 OR5AS1Q8N127 324 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 SCN2AQ99250 2005 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 BET1O15155 118 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 TSPAN9O75954 239 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 APOC3P02656 99 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 MAP2K6P52564 334 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 IRF3Q14653 427 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 FXNQ16595 210 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 MESTQ5EB52 335 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 LILRB4Q8NHJ6 448 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 NANOS1Q8WY41 292 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 JAM3Q9BX67 310 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 PRDM6Q9NQX0 595 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 GAAP10253 952 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 LAP3P28838 519 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 EIF1P41567 113 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 PRSS12P56730 875 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 MYBPHQ13203 477 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 MFAP5Q13361 173 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF813Q6ZN06 617 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 RAB11FIP2Q7L804 512 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 PDZD9Q8IXQ8 264 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 EIF5A2Q9GZV4 153 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 PLA2G3Q9NZ20 509 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 EMC3Q9P0I2 261 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 MLXQ9UH92 298 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 FRMPD3Q5JV73 1810 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 TMEM235A6NFC5 223 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 STMND1H3BQB6 276 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 YKT6O15498 198 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 DIRAS3O95661 229 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 LALBAP00709 142 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 RGS19P49795 217 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF121P58317 390 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF616Q08AN1 781 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 LTC4SQ16873 150 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 PLEKHN1Q494U1 663 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 WDR38Q5JTN6 314 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 NOXO1Q8NFA2 376 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 OR2G2Q8NGZ5 317 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 PELI1Q96FA3 418 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 NECAB3Q96P71 396 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 GNRHR2Q96P88 292 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 NEURL2Q9BR09 285 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 AICDAQ9GZX7 198 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 DNTTIP1Q9H147 329 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 GPR84Q9NQS5 396 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 PILRAQ9UKJ1 303 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 FOXJ3Q9UPW0 622 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 A0A0B4J2A0 478 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 SMCO3A2RU48 225 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 HSD17B6O14756 317 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 ICAM2P13598 275 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 SPINK2P20155 84 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 C3P1Q6ZMU1 363 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF695Q8IW36 515 aa8.05□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF679Q8IYX0 411 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms