RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 hCG_1807616A0A1W2PRN6 198 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 HSPB2A8KAH6 182 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CTDSPLO15194 276 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ZNF254O75437 659 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ADRB1P08588 477 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 PET100P0DJ07 73 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SULT1A3P0DMM9 295 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SULT1A4P0DMN0 295 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 NAGAP17050 411 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 AFF3P51826 1226 aaKnown RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 CYCSP99999 105 aaKnown RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 MGAT2Q10469 447 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SLC9A3R2Q15599 337 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 HSPB2Q16082 182 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 PLEKHN1Q494U1 663 aaPredicted RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 NKAIN1Q4KMZ8 207 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SLC22A18ASQ8N1D0 253 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SCARB1Q8WTV0 552 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SPACA5Q96QH8 159 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SDHAF2Q9NX18 166 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 PLEK2Q9NYT0 353 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 RHBDD3Q9Y3P4 386 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 FRMPD3Q5JV73 1810 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 KNTC1P50748 2209 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ANKRD20A5PA0PJZ0 165 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 C4orf47A7E2U8 309 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 STK17BO94768 372 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 IL5P05113 134 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 GAAP10253 952 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CCNOP22674 350 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CBX5P45973 191 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CSNK1A1P48729 337 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ETFDHQ16134 617 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SLC36A2Q495M3 483 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ELFN2Q5R3F8 820 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 TMEM81Q6P7N7 255 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 LANCL3Q6ZV70 420 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 RHOUQ7L0Q8 258 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 LIX1LQ8IVB5 337 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 OR10K1Q8NGX5 313 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 RAB3CQ96E17 227 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 TMEM59Q9BXS4 323 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 MRPS28Q9Y2Q9 187 aaKnown RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 LRP12Q9Y561 859 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 OR4C45A6NMZ5 311 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 METTL12A8MUP2 240 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 H7C2Y5 167 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ERVH48-1M5A8F1 160 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 WRBO00258 174 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CTAG2O75638 210 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 IGHV4-34P06331 123 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CTLA4P16410 223 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 TAS2R31P59538 309 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ISXQ2M1V0 245 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 C1QTNF12Q5T7M4 302 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 ANKRD16Q6P6B7 361 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 NHLRC1Q6VVB1 395 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 C16orf47Q6ZP98 133 aaPredicted RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 PPP1R3BQ86XI6 285 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 OR5T2Q8NGG2 359 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 OR51A4Q8NGJ6 313 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 VRK1Q99986 396 aaPredicted RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 NAA11Q9BSU3 229 aaPredicted RBP7.84□□□□□ -1.15
LIG4-204ENST00000611712 KCNK15Q9H427 330 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 SCPEP1Q9HB40 452 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CHST11Q9NPF2 352 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 CTSFQ9UBX1 484 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 R4GMQ9 66 aa7.84□□□□□ -1.15
LIG4-204ENST00000611712 FAM186AA6NE01 2351 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 ZNF850A8MQ14 1090 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 KRBOX1C9JBD0 128 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 ALOX12BO75342 701 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 OR4E1P0C645 316 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 UBBP0CG47 229 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 CXCL12P48061 93 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 SLC37A1P57057 533 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 RPS27AP62979 156 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 UBA52P62987 128 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 DCDP81605 110 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 FMODQ06828 376 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 SKP2Q13309 424 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 Q5BKY6 102 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 CLLU1Q5K131 121 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 HAGHLQ6PII5 290 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 OR1N1Q8NGS0 311 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 NUDCD2Q8WVJ2 157 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 ZNF775Q96BV0 537 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 SLAMF6Q96DU3 332 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 NECAB3Q96P71 396 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 KLHDC2Q9Y2U9 406 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 KCNIP3Q9Y2W7 256 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 DCTN6O00399 190 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 MTRF1O75570 445 aaKnown RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 WDPCPO95876 746 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 PMP2P02689 132 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 SERPINA5P05154 406 aa7.83□□□□□ -1.16
LIG4-204ENST00000611712 TMIGD3P0DMS9 266 aaPredicted RBP7.83□□□□□ -1.16
LIG4-204ENST00000611712 IL9P15248 144 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms