RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 RGS11O94810 467 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 SDHBP21912 280 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 S100PP25815 95 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 GFERP55789 205 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 AANATQ16613 207 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 ZNF770Q6IQ21 691 aaPredicted RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 MOB3CQ70IA8 216 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 NUDCD2Q8WVJ2 157 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 MAP6Q96JE9 813 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 SLC33A1O00400 549 aaPredicted RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 ALOX12BO75342 701 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 DPP4P27487 766 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 MSX1P28360 303 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 EIF1P41567 113 aaKnown RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 FASLGP48023 281 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 CCR5P51681 352 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 SLC25A1P53007 311 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 LYSMD4Q5XG99 296 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 FBXW12Q6X9E4 464 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 ACOT7LQ6ZUV0 252 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 RELL2Q8NC24 303 aaPredicted RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 RNF128Q8TEB7 428 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 ZC3HAV1LQ96H79 300 aaKnown RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 MMP25Q9NPA2 562 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 FAM212BQ9NTI7 297 aaPredicted RBP11.28□□□□□ -0.6
CDH1-212ENST00000611625 KLHL13Q9P2N7 655 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 PCDHGA1Q9Y5H4 931 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 IMPA2O14732 288 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 BPNT1O95861 308 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 IFNA17P01571 189 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 MSL3P1P0C860 447 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 PCBD1P61457 104 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 GUCA2AQ02747 115 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 ABHD17BQ5VST6 288 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 YIPF5Q969M3 257 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 PIGTQ969N2 578 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 PFDN5Q99471 154 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 R4GMQ9 66 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 NDUFB6O95139 128 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 CD79AP11912 226 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 GSG1Q2KHT4 349 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 ZXDCQ2QGD7 858 aaPredicted RBP11.27□□□□□ -0.6
CDH1-212ENST00000611625 DMKNQ6E0U4 476 aaPredicted RBP11.27□□□□□ -0.6
CDH1-212ENST00000611625 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 OR51E1Q8TCB6 317 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 SGCZQ96LD1 299 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 ABHD6Q9BV23 337 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 KIF25Q9UIL4 384 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 LSM2Q9Y333 95 aaKnown RBP11.27□□□□□ -0.6
CDH1-212ENST00000611625 FRG2CA6NGY1 282 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 ATP6V1G2-DDX39BF2Z307 99 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 LAMTOR5O43504 91 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 GLSO94925 669 aaPredicted RBP11.27□□□□□ -0.6
CDH1-212ENST00000611625 POU3F2P20265 443 aaPredicted RBP11.27□□□□□ -0.6
CDH1-212ENST00000611625 SLC16A14Q7RTX9 510 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 FAM122BQ7Z309 247 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 OR5M1Q8NGP8 315 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 SLAMF9Q96A28 289 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 KTI12Q96EK9 354 aaPredicted RBP11.27□□□□□ -0.6
CDH1-212ENST00000611625 OR8B4Q96RC9 309 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 DLL4Q9NR61 685 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 KCNIP1Q9NZI2 227 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 WIF1Q9Y5W5 379 aa11.27□□□□□ -0.6
CDH1-212ENST00000611625 ATG2BQ96BY7 2078 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 IDSB3KWA1 339 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 BHLHE40O14503 412 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 GRB2P62993 217 aaKnown RBP11.27□□□□□ -0.61
CDH1-212ENST00000611625 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
CDH1-212ENST00000611625 MKXQ8IYA7 352 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 MVB12AQ96EY5 273 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 WDR89Q96FK6 387 aaPredicted RBP11.27□□□□□ -0.61
CDH1-212ENST00000611625 MED29Q9NX70 200 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 FOXJ3Q9UPW0 622 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 SCN4AP35499 1836 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 G3V3Y1 287 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 TK1P04183 234 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 ZNF85Q03923 595 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.61
CDH1-212ENST00000611625 CDONQ4KMG0 1287 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 NKAIN1Q4KMZ8 207 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 PRSS35Q8N3Z0 413 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 OTOSQ8NHW6 89 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 OR5B12Q96R08 314 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 SLC25A32Q9H2D1 315 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.61
CDH1-212ENST00000611625 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
CDH1-212ENST00000611625 ASH2LQ9UBL3 628 aa11.27□□□□□ -0.61
CDH1-212ENST00000611625 CT62P0C5K7 136 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 ALOX5APP20292 161 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 CHATP28329 748 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
CDH1-212ENST00000611625 S100A12P80511 92 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 SHHQ15465 462 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 DOK3Q7L591 496 aa11.26□□□□□ -0.61
CDH1-212ENST00000611625 KIAA0907Q7Z7F0 614 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms