RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 Q96MF0 132 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 COG8Q96MW5 612 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 TSSK2Q96PF2 358 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 DCLRE1CQ96SD1 692 aaKnown RBP12.3□□□□□ -0.44
HDDC2-206ENST00000608461 RBM4Q9BWF3 364 aaKnown RBP12.3□□□□□ -0.44
HDDC2-206ENST00000608461 OSBPL10Q9BXB5 764 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 MYOZ1Q9NP98 299 aaPredicted RBP12.3□□□□□ -0.44
HDDC2-206ENST00000608461 EMC7Q9NPA0 242 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 DLL4Q9NR61 685 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 CMC2Q9NRP2 79 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 ASH2LQ9UBL3 628 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 LOC100509620A0A075B734 347 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 C5orf49A4QMS7 147 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 RIIAD1A6NNX1 92 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 FAM171A2A8MVW0 826 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 SOX14O95416 240 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 HMGN1P05114 100 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 NUDT6P53370 316 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 ACTR3P61158 418 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 HIST1H3AP68431 136 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 TEKQ02763 1124 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 CCNIQ14094 377 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 HIST2H3PS2Q5TEC6 136 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 ZNF774Q6NX45 483 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 FAHD1Q6P587 224 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 UGT2A3Q6UWM9 527 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 HIST2H3AQ71DI3 136 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 PARP8Q8N3A8 854 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 SVOPLQ8N434 492 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 PAQR4Q8N4S7 273 aaPredicted RBP12.29□□□□□ -0.44
HDDC2-206ENST00000608461 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 SLC37A3Q8NCC5 494 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 OR10H5Q8NGA6 315 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 AKR7LQ8NHP1 331 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 NEU4Q8WWR8 484 aaPredicted RBP12.29□□□□□ -0.44
HDDC2-206ENST00000608461 CDADC1Q9BWV3 514 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 HDHD2Q9H0R4 259 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 SLCO1C1Q9NYB5 712 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 PLEK2Q9NYT0 353 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 ENOPH1Q9UHY7 261 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 GDF2Q9UK05 429 aaPredicted RBP12.29□□□□□ -0.44
HDDC2-206ENST00000608461 POLR1DQ9Y2S0 133 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 F8P00451 2351 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 ARFGEF3Q5TH69 2177 aa12.29□□□□□ -0.44
HDDC2-206ENST00000608461 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 IGLV3-9A0A075B6K5 115 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 G3V2T6 193 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 GPRIN2O60269 458 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 DOK2O60496 412 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 MPZL1O95297 269 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 LCKP06239 509 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 CCL2P13500 99 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 PAICSP22234 425 aaKnown RBP12.28□□□□□ -0.44
HDDC2-206ENST00000608461 CCNOP22674 350 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 CDK5Q00535 292 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 ECH1Q13011 328 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 ZFP1Q6P2D0 407 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 VASH1Q7L8A9 365 aaPredicted RBP12.28□□□□□ -0.44
HDDC2-206ENST00000608461 ZDHHC13Q8IUH4 622 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 PROKR2Q8NFJ6 384 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 OR2AJ1Q8NGZ0 328 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 OR4Q3Q8NH05 313 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 SYNPRQ8TBG9 265 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 C4orf45Q96LM5 186 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 RHNO1Q9BSD3 238 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
HDDC2-206ENST00000608461 NMNAT2Q9BZQ4 307 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
HDDC2-206ENST00000608461 KIF17Q9P2E2 1029 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 CYB5R1Q9UHQ9 305 aa12.28□□□□□ -0.44
HDDC2-206ENST00000608461 FLNAP21333 2647 aaKnown RBP12.27□□□□□ -0.44
HDDC2-206ENST00000608461 M0R233 179 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 NDUFS8O00217 210 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 SSX4O60224 188 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 NDUFS7O75251 213 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 HLA-DQA2P01906 255 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 TFP02787 698 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 IGFBP1P08833 259 aaPredicted RBP12.27□□□□□ -0.45
HDDC2-206ENST00000608461 FAM157BP0CG42 384 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 ZNF823P16415 610 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 PRKACGP22612 351 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 FMO3P31513 532 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 LIPAP38571 399 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 HTR5AP47898 357 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 RGS6P49758 472 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 ERFP50548 548 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 KLF3P57682 345 aaPredicted RBP12.27□□□□□ -0.45
HDDC2-206ENST00000608461 ESRRGP62508 458 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 ZNF718Q3SXZ3 478 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 MBNL2Q5VZF2 373 aaKnown RBP12.27□□□□□ -0.45
HDDC2-206ENST00000608461 CLEC2AQ6UVW9 174 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 BIVMQ86UB2 503 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 OR1J1Q8NGS3 322 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 OR1F12Q8NHA8 337 aa12.27□□□□□ -0.45
HDDC2-206ENST00000608461 CENPNQ96H22 339 aaPredicted RBP12.27□□□□□ -0.45
HDDC2-206ENST00000608461 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms