RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NR4A1P22736 598 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 APEX1P27695 318 aaKnown RBP12.34□□□□□ -0.43
CTSA-219ENST00000607841 PCSK6P29122 969 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 GSTT1P30711 240 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 TTKP33981 857 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 GGT2P36268 569 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 POLR2IP36954 125 aaKnown RBP12.34□□□□□ -0.43
CTSA-219ENST00000607841 RAD52P43351 418 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 ENTPD1P49961 510 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 CDC42P60953 191 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 RPS7P62081 194 aaKnown RBP12.34□□□□□ -0.43
CTSA-219ENST00000607841 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
CTSA-219ENST00000607841 HGFACQ04756 655 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 AGAP6Q5VW22 663 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
CTSA-219ENST00000607841 TCEANCQ8N8B7 351 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 TMEM171Q8WVE6 324 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 ZNRF4Q8WWF5 429 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 RDH12Q96NR8 316 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 SLC29A1Q99808 456 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 HCAR1Q9BXC0 346 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 HDHD2Q9H0R4 259 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 MRPL22Q9NWU5 206 aaKnown RBP12.34□□□□□ -0.43
CTSA-219ENST00000607841 CYB5R1Q9UHQ9 305 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 ATPIF1Q9UII2 106 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 PLEKHA6Q9Y2H5 1048 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 LHFPL6Q9Y693 200 aa12.34□□□□□ -0.43
CTSA-219ENST00000607841 NOTCH2Q04721 2471 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 C5orf49A4QMS7 147 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 ZNF593O00488 134 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 RER1O15258 196 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 PRKYO43930 277 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 ATE1O95260 518 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 DANCRP0C864 163 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 BMP4P12644 408 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 CCL2P13500 99 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 GLRXP35754 106 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 HTR5AP47898 357 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 HIST1H3AP68431 136 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 DBPQ10586 325 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 ECH1Q13011 328 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 RAB35Q15286 201 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 ZIK1Q3SY52 487 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 CCDC92Q53HC0 331 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 HIST2H3PS2Q5TEC6 136 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 LINC01590Q5TEZ4 76 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 LCN1P1Q5VSP4 162 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 OTPQ5XKR4 325 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 SLC18B1Q6NT16 456 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 B3GLCTQ6Y288 498 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 VASH1Q7L8A9 365 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 C1orf174Q8IYL3 243 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 MUC15Q8N387 334 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 OR8J1Q8NGP2 316 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 TMEM163Q8TC26 289 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 TRUB1Q8WWH5 349 aaKnown RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 IPCEF1Q8WWN9 437 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 INTS14Q96SY0 518 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 BCL2L14Q9BZR8 327 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 CXorf56Q9H5V9 222 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 IMPAD1Q9NX62 359 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 GDF2Q9UK05 429 aaPredicted RBP12.33□□□□□ -0.44
CTSA-219ENST00000607841 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 COMMD3-BMI1R4GMX3 469 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 FBN2P35556 2912 aa12.33□□□□□ -0.44
CTSA-219ENST00000607841 DCHS2Q6V1P9 2916 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 OR6C6A6NF89 314 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 SPARCP09486 303 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 CD53P19397 219 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 THBS4P35443 961 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 SERPINF1P36955 418 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 UCP2P55851 309 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
CTSA-219ENST00000607841 EFNB1P98172 346 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 PCK2Q16822 640 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 NXNL2Q5VZ03 156 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 CORO6Q6QEF8 472 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 SHFQ7M4L6 423 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 ERI1Q8IV48 349 aaKnown RBP12.32□□□□□ -0.44
CTSA-219ENST00000607841 LINC00346Q8IVM7 164 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 HRASLS5Q96KN8 279 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 DCLRE1CQ96SD1 692 aaKnown RBP12.32□□□□□ -0.44
CTSA-219ENST00000607841 PITX2Q99697 317 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 COQ7Q99807 217 aa12.32□□□□□ -0.44
CTSA-219ENST00000607841 VCXQ9H320 206 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms