RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CDK5R2Q13319 367 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 MESTQ5EB52 335 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 MTX3Q5HYI7 312 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 C12orf54Q6X4T0 127 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 USP43Q70EL4 1123 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 RRM2BQ7LG56 351 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 FAM122BQ7Z309 247 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 ZER1Q7Z7L7 766 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 PEG10Q86TG7 708 aaKnown RBP6.45□□□□□ -1.38
CUX1-219ENST00000606749 TEX29Q8N6K0 151 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 OR4M2Q8NGB6 313 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 ZNF418Q8TF45 676 aaPredicted RBP6.45□□□□□ -1.38
CUX1-219ENST00000606749 HSH2DQ96JZ2 352 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 DIRC2Q96SL1 478 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 POFUT1Q9H488 388 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 ANKRD19PQ9H560 264 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 EFCAB1Q9HAE3 211 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 EMC7Q9NPA0 242 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 TUBG2Q9NRH3 451 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 ZNF446Q9NWS9 450 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 CGGBP1Q9UFW8 167 aaPredicted RBP6.45□□□□□ -1.38
CUX1-219ENST00000606749 NDRG4Q9ULP0 352 aaKnown RBP6.45□□□□□ -1.38
CUX1-219ENST00000606749 STARD10Q9Y365 291 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 ENPP4Q9Y6X5 453 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 TEX13CA0A0J9YWL9 993 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 A0A1W2PRQ8 180 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 ISPDA4D126 451 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 XKRYO14609 159 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 SGCEO43556 437 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 TIMM8AO60220 97 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 SLC16A7O60669 478 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 CCDC22O60826 627 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 ABHD16AO95870 558 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 SBK2P0C263 348 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 CTLA4P16410 223 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 GSTM3P21266 225 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 KITLGP21583 273 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 GATA3P23771 443 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 CFPP27918 469 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 OMPP47874 163 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 GSK3BP49841 420 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 HILS1P60008 231 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 LCN2P80188 198 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 TNFAIP6P98066 277 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 SCRN3Q0VDG4 424 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 HNRNPA0Q13151 305 aaKnown RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 DGCR6Q14129 220 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 ZMAT1Q5H9K5 638 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 DCAF12L2Q5VW00 463 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 GPR139Q6DWJ6 353 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 HACD2Q6Y1H2 254 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 Q6ZR03 302 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 ZNF771Q7L3S4 317 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 VASH1Q7L8A9 365 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 C1QL2Q7Z5L3 287 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 CYP4Z1Q86W10 505 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 TREML1Q86YW5 311 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 NANPQ8TBE9 248 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 SLC7A13Q8TCU3 470 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 FAM216AQ8WUB2 273 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 SLC7A6Q92536 515 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 FAM162AQ96A26 154 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 RASD2Q96D21 266 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 HAVCR1Q96D42 359 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 CMBLQ96DG6 245 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 FAM46AQ96IP4 442 aaKnown RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 SAMD8Q96LT4 415 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 DCLRE1CQ96SD1 692 aaKnown RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 GAL3ST1Q99999 423 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 KCTD14Q9BQ13 255 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 C7orf69Q9H7B7 122 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 NRIP3Q9NQ35 241 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 TMEM106BQ9NUM4 274 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 DCAF16Q9NXF7 216 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 UBAP1Q9NZ09 502 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 NDUFAF4Q9P032 175 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 EGFL7Q9UHF1 273 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 OPN4Q9UHM6 478 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 PURGQ9UJV8 347 aaKnown RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 SIGLEC7Q9Y286 467 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 TMEM5Q9Y2B1 443 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 COA3Q9Y2R0 106 aaPredicted RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 FAM32AQ9Y421 112 aaKnown RBP6.44□□□□□ -1.38
CUX1-219ENST00000606749 NPTNQ9Y639 398 aa6.44□□□□□ -1.38
CUX1-219ENST00000606749 ARHGAP32A7KAX9 2087 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 PPIAL4EA0A075B759 164 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 PPIAL4CA0A0B4J2A2 164 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 TMEM89A2RUT3 159 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 OR6C6A6NF89 314 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 PPIAL4DF5H284 164 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 TRIM77I1YAP6 450 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 NDUFAB1O14561 156 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 IMPA2O14732 288 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 DOK2O60496 412 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 KHDRBS3O75525 346 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 NDUFB2O95178 105 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 IGHV2-70P01814 119 aa6.43□□□□□ -1.38
CUX1-219ENST00000606749 H1F0P07305 194 aaKnown RBP6.43□□□□□ -1.38
CUX1-219ENST00000606749 PPIAL4FP0DN26 164 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms