RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SRXN1Q9BYN0 137 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 TCF7L1Q9HCS4 588 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 EMC7Q9NPA0 242 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 CYB5R1Q9UHQ9 305 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 AIPO00170 330 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 EIF1AYO14602 144 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 DOK2O60496 412 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CD82P27701 267 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 EIF1AXP47813 144 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CBX3Q13185 183 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CCDC92Q53HC0 331 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 LRFN4Q6PJG9 635 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 ESPNLQ6ZVH7 1005 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 UBE2J2Q8N2K1 259 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 DNAAF1Q8NEP3 725 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 OR14L1PQ8NHC6 308 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 ABHD1Q96SE0 405 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 SEC61A2Q9H9S3 476 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 LRFN1Q9P244 771 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 EMC9Q9Y3B6 208 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 V9GY05 133 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 ZNF726A6NNF4 738 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 SLC43A1O75387 559 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 QDPRP09417 244 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 ENPP1P22413 925 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 TALDO1P37837 337 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CLDN12P56749 244 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CARTPTQ16568 116 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 TRIQKQ629K1 86 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CREB3L2Q70SY1 520 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 OR10H5Q8NGA6 315 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 OR10S1Q8NGN2 331 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 ZNF671Q8TAW3 534 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 RNF133Q8WVZ7 376 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 NKD1Q969G9 470 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 ZNF385AQ96PM9 386 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 SIGLEC12Q96PQ1 595 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 CENPMQ9NSP4 180 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 TEKT2Q9UIF3 430 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 SPATA2Q9UM82 520 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 R4GMQ9 66 aa15.13■□□□□ 0.01
SHKBP1-216ENST00000598201 NCOR2Q9Y618 2525 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 LANCL1O43813 399 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 EIF1BO60739 113 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 NEURL1O76050 574 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 RAF1P04049 648 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 MAS1P04201 325 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 PITPNBP48739 271 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 FOXO1Q12778 655 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 WIPI1Q5MNZ9 446 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 JMJD6Q6NYC1 403 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 HDDC2Q7Z4H3 204 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 TSEN15Q8WW01 171 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 G6PC2Q9NQR9 355 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 PCDHGA9Q9Y5G4 932 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 LHFPL6Q9Y693 200 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 CELSR3Q9NYQ7 3312 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 CNR1P21554 472 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 ITGA3P26006 1051 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 CSNK2A1P68400 391 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 PHYHD1Q5SRE7 291 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 ASPHD2Q6ICH7 369 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 CFAP77Q6ZQR2 320 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 SLAMF6Q96DU3 332 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 WACQ9BTA9 647 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 HES7Q9BYE0 225 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 SLITRK2Q9H156 845 aa15.12■□□□□ 0.01
SHKBP1-216ENST00000598201 TRAPPC6AO75865 159 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 STARP49675 285 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 ABHD17BQ5VST6 288 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 GGNQ86UU5 652 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 IL22RA1Q8N6P7 574 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 C19orf18Q8NEA5 215 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 OR9K2Q8NGE7 335 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 SLC22A4Q9H015 551 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 LIN7BQ9HAP6 207 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 ZFP64Q9NPA5 681 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 MED13Q9UHV7 2174 aa15.11■□□□□ 0.01
SHKBP1-216ENST00000598201 CEP295Q9C0D2 2601 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 SMAD9O15198 467 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 H2BFMP0C1H6 154 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 AGFG1P52594 562 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 SUCLG1P53597 346 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 TGIF1Q15583 401 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 ATP1A1-AS1Q5TC04 95 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 DEGS2Q6QHC5 323 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 DTX1Q86Y01 620 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 ZIC4Q8N9L1 334 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 OR2M2Q96R28 347 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 NAA11Q9BSU3 229 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 MMP28Q9H239 520 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 PLA2G3Q9NZ20 509 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 GDF2Q9UK05 429 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 OR52A1Q9UKL2 312 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 PHF3Q92576 2039 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 TMEM269A0A1B0GVZ9 245 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 GJE1A6NN92 205 aa15.1■□□□□ 0.01
SHKBP1-216ENST00000598201 GDF1P27539 372 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms