RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SELENOFO60613 162 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 APOL3O95236 402 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 RAB36O95755 333 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 GPANK1O95872 356 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 HRGP04196 525 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 SPARCP09486 303 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 GAAP10253 952 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 MYL12AP19105 171 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 NPR2P20594 1047 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 MSR1P21757 451 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 CDAP32320 146 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 ENTPD1P49961 510 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 NKX6-1P78426 367 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 MRPS34P82930 218 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 SGCAQ16586 387 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 LINC01590Q5TEZ4 76 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 C9orf135Q5VTT2 229 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 LYPD4Q6UWN0 246 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF813Q6ZN06 617 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 LINGO2Q7L985 606 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC16A9Q7RTY1 509 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF511Q8NB15 262 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC26A10Q8NG04 563 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 OR6N2Q8NGY6 317 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNRF4Q8WWF5 429 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 LGALS12Q96DT0 336 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 CDADC1Q9BWV3 514 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 CCDC90BQ9GZT6 254 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 KCNN2Q9H2S1 579 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 ADGRL4Q9HBW9 690 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 POLE4Q9NR33 117 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 TMEM38BQ9NVV0 291 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 TAS2R16Q9NYV7 291 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 UGT2A1Q9Y4X1 527 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 DOCK7Q96N67 2140 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 PHF3Q92576 2039 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 RGS10O43665 173 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 TMCC2O75069 709 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SEC14L2O76054 403 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 CGAP01215 116 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SBK2P0C263 348 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 B4GALT1P15291 398 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC15A1P46059 708 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC35A2P78381 396 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 ARF1P84077 181 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 ST3GAL4Q11206 333 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 MEP1BQ16820 701 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 NRN1LQ496H8 165 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 FOXL2NBQ6ZUU3 175 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SHFQ7M4L6 423 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 LUZP2Q86TE4 346 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC35F2Q8IXU6 374 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 TIGD4Q8IY51 512 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF610Q8N9Z0 462 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 OR10H4Q8NGA5 316 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 OR4F15Q8NGB8 312 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 OR2AJ1Q8NGZ0 328 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 C11orf40Q8WZ69 217 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 GGHQ92820 318 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 MRPL48Q96GC5 212 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 TMEM80Q96HE8 168 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 MYCBPQ99417 103 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 MNTQ99583 582 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 RHNO1Q9BSD3 238 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 YIPF3Q9GZM5 350 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 WDR76Q9H967 626 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 MARCH7Q9H992 704 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 EMC7Q9NPA0 242 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 MRPS18AQ9NVS2 196 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 CHCHD3Q9NX63 227 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 GALNT8Q9NY28 637 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 SNX5Q9Y5X3 404 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 TMEM14AQ9Y6G1 99 aa10.55□□□□□ -0.72
SHKBP1-213ENST00000597325 DAPL1A0PJW8 107 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 CIB4A0PJX0 185 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 C12orf71A8MTZ7 269 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF670-ZNF695F2Z2N8 137 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF593O00488 134 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 PHYHO14832 338 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 MPZL1O95297 269 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 TFP02787 698 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 CDK1P06493 297 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ITGA5P08648 1049 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 OR8G3PP0DMU2 310 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 IGHV1-2P23083 117 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 DCKP27707 260 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 PCBD1P61457 104 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 LSM6P62312 80 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 P2RY6Q15077 328 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 KCNMB1Q16558 191 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC25A35Q3KQZ1 300 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ANKRD16Q6P6B7 361 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 KLHL24Q6TFL4 600 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 LRRC18Q8N456 261 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 SLC22A24Q8N4F4 322 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ACBD7Q8N6N7 88 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 OR52I1Q8NGK6 324 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 OR1K1Q8NGR3 316 aa10.54□□□□□ -0.72
SHKBP1-213ENST00000597325 NABP1Q96AH0 204 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms