RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TLE4Q04727 773 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 SEC23BQ15437 767 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 BAK1Q16611 211 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 YIF1BQ5BJH7 314 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 SLC35D2Q76EJ3 337 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 NANOGP1Q8N7R0 232 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 OR4K5Q8NGD3 323 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 GTPBP3Q969Y2 492 aaKnown RBP17.24■□□□□ 0.35
LSM4-203ENST00000593829 ZC3HAV1LQ96H79 300 aaKnown RBP17.24■□□□□ 0.35
LSM4-203ENST00000593829 TRAF4Q9BUZ4 470 aaPredicted RBP17.24■□□□□ 0.35
LSM4-203ENST00000593829 KRCC1Q9NPI7 259 aaPredicted RBP17.24■□□□□ 0.35
LSM4-203ENST00000593829 HIF3AQ9Y2N7 669 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 NBPF19A0A087WUL8 3843 aa17.24■□□□□ 0.35
LSM4-203ENST00000593829 CIB4A0PJX0 185 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 ZNF587BE7ETH6 402 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 GASTP01350 101 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 MPGP29372 298 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 GPR4P46093 362 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 FOXG1P55316 489 aaPredicted RBP17.23■□□□□ 0.35
LSM4-203ENST00000593829 LGALS3BPQ08380 585 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 OCLNQ16625 522 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 C22orf34Q6ZV56 151 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 OAFQ86UD1 273 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 NOXA1Q86UR1 476 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 TMEM123Q8N131 208 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 OR9Q1Q8NGQ5 310 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 SLC25A46Q96AG3 418 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 ADAD1Q96M93 576 aaKnown RBP17.23■□□□□ 0.35
LSM4-203ENST00000593829 TMEM246Q9BRR3 403 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 MCCC2Q9HCC0 563 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 REV1Q9UBZ9 1251 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 TMCC3Q9ULS5 477 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 MGAT4BQ9UQ53 548 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 RPL36Q9Y3U8 105 aaKnown RBP17.23■□□□□ 0.35
LSM4-203ENST00000593829 A0A1W2PQ09 198 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 A0A1W2PRG6 482 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 A6NNC1 897 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 M0R129 80 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 ENTPD6O75354 484 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 UPK3AO75631 287 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 ITGA5P08648 1049 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 HLA-DMAP28067 261 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 BIDP55957 195 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 TGFBR3Q03167 851 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 GPR137CQ8N3F9 429 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 MOSPD2Q8NHP6 518 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 HSD17B8Q92506 261 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 FAM46AQ96IP4 442 aaKnown RBP17.23■□□□□ 0.35
LSM4-203ENST00000593829 ALKBH3Q96Q83 286 aaPredicted RBP17.23■□□□□ 0.35
LSM4-203ENST00000593829 SSR3Q9UNL2 185 aa17.23■□□□□ 0.35
LSM4-203ENST00000593829 RGS5O15539 181 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 RAD51DO75771 328 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 F13BP05160 661 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 THBDP07204 575 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 GNG2P59768 71 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 RPS4XP62701 263 aaKnown RBP17.22■□□□□ 0.35
LSM4-203ENST00000593829 SLC25A30Q5SVS4 291 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 C9orf135Q5VTT2 229 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 CARD17Q5XLA6 110 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 OR7E24Q6IFN5 339 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 LAX1Q8IWV1 398 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 OR51A7Q8NH64 312 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 OR6X1Q8NH79 312 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 GON7Q9BXV9 100 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 EXOSC4Q9NPD3 245 aaKnown RBP17.22■□□□□ 0.35
LSM4-203ENST00000593829 DCHS2Q6V1P9 2916 aa17.22■□□□□ 0.35
LSM4-203ENST00000593829 CDC42EP2O14613 210 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 GOSR1O95249 250 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 CRYGSP22914 178 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 OMPP47874 163 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 CAMK2DQ13557 499 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 ALG10Q5BKT4 473 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 SLC35F1Q5T1Q4 408 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 C20orf196Q8IYI0 205 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 TCTE3Q8IZS6 198 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 OR13C2Q8NGS9 318 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 LRR1Q96L50 414 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 TNFRSF13CQ96RJ3 184 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 TRAV27A0A087WT01 109 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 CCDC182A6NF36 153 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 IFNGR2P38484 337 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 STK11Q15831 433 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 GABRA6Q16445 453 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 LINGO2Q7L985 606 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 C1orf162Q8NEQ5 155 aaPredicted RBP17.21■□□□□ 0.35
LSM4-203ENST00000593829 OR8J1Q8NGP2 316 aa17.21■□□□□ 0.35
LSM4-203ENST00000593829 FAM221AA4D161 298 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 OR5H1A6NKK0 313 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 RPL36A-HNRNPH2H7BZ11 118 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 OR10H3O60404 316 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 CTAG2O75638 210 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 DAP3P51398 398 aaKnown RBP17.2■□□□□ 0.34
LSM4-203ENST00000593829 PRPS1P60891 318 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 FHL1Q13642 323 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 MELKQ14680 651 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 TAB1Q15750 504 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 ZMAT1Q5H9K5 638 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 TIMM23BQ5SRD1 257 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 HDDC2Q7Z4H3 204 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 WDFY1Q8IWB7 410 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms