RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PPP1R3DO95685 299 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 PTHP01270 115 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 CSF3P09919 207 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 APEX1P27695 318 aaKnown RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 PCSK6P29122 969 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 IFNGR2P38484 337 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 CDKN2AP42771 156 aaKnown RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 RPS23P62266 143 aaKnown RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 GALK2Q01415 458 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 PLP2Q04941 152 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 TSPAN31Q12999 210 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 TBC1D28Q2M2D7 210 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 CLEC2AQ6UVW9 174 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 UGT2A3Q6UWM9 527 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF620Q6ZNG0 422 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 Q71RC1 249 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 MAPK1IP1LQ8NDC0 245 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 OR9Q2Q8NGE9 314 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 AKR7LQ8NHP1 331 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 C10orf105Q8TEF2 133 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 POP5Q969H6 163 aaKnown RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 WDR89Q96FK6 387 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 POM121L2Q96KW2 1035 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 RHNO1Q9BSD3 238 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 THTPAQ9BU02 230 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 OR2H1Q9GZK4 316 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 SYT4Q9H2B2 425 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 CDH20Q9HBT6 801 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 CCNB1IP1Q9NPC3 277 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 MYEF2Q9P2K5 600 aaKnown RBP9.62□□□□□ -0.87
SMAD4-211ENST00000590499 TMCC3Q9ULS5 477 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 FKBP7Q9Y680 259 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 IQCMA0A1B0GVH7 501 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 VWC2LB2RUY7 222 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 TNFRSF11BO00300 401 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 STOMP27105 288 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 SLC6A6P31641 620 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 WNT5AP41221 380 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 RPS6KA3P51812 740 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 HSF2Q03933 536 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 TRAP1Q12931 704 aaKnown RBP9.61□□□□□ -0.87
SMAD4-211ENST00000590499 DNAL1Q4LDG9 190 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 FAM98BQ52LJ0 330 aaKnown RBP9.61□□□□□ -0.87
SMAD4-211ENST00000590499 OR2T5Q6IEZ7 315 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 LRP11Q86VZ4 500 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 ADGRG5Q8IZF4 528 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 ZCCHC24Q8N2G6 241 aaKnown RBP9.61□□□□□ -0.87
SMAD4-211ENST00000590499 LINC00471Q8N535 108 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 OR1J2Q8NGS2 313 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 OR2T29Q8NH02 315 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 GNPDA2Q8TDQ7 276 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 FAM168AQ92567 244 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 SAMD8Q96LT4 415 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 SNX18Q96RF0 628 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 VRK1Q99986 396 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-211ENST00000590499 SYT3Q9BQG1 590 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 WACQ9BTA9 647 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 NUAK2Q9H093 628 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 KCNN2Q9H2S1 579 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 EMC7Q9NPA0 242 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 TIMM10BQ9Y5J6 103 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 CDH10Q9Y6N8 788 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 MALRD1Q5VYJ5 2156 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 DNHD1Q96M86 4753 aa9.61□□□□□ -0.87
SMAD4-211ENST00000590499 IGLV3-9A0A075B6K5 115 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 IGLV1-36A0A0B4J1U3 117 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 AQP12BA6NM10 295 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 C12orf71A8MTZ7 269 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 DCTN6O00399 190 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 GYG2O15488 501 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 SYNGR3O43761 229 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 SLC16A7O60669 478 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 KHDRBS3O75525 346 aaKnown RBP9.6□□□□□ -0.87
SMAD4-211ENST00000590499 RAP2AP10114 183 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 GAAP10253 952 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF250P15622 560 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 SLC25A16P16260 332 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 HIST1H1CP16403 213 aaKnown RBP9.6□□□□□ -0.87
SMAD4-211ENST00000590499 APLNRP35414 380 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 UCP2P55851 309 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 PCBD1P61457 104 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 ERVS71-1P61550 626 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 PPP1R8Q12972 351 aaKnown RBP9.6□□□□□ -0.87
SMAD4-211ENST00000590499 BNIP1Q12981 228 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 KCNMB1Q16558 191 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 RGS7BPQ6MZT1 257 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF774Q6NX45 483 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 GLB1L2Q8IW92 636 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 AQP12AQ8IXF9 295 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF101Q8IZC7 436 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 OR8D4Q8NGM9 314 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-211ENST00000590499 FOXN4Q96NZ1 517 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 TSSK2Q96PF2 358 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 ERMAPQ96PL5 475 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-211ENST00000590499 PLA2G12AQ9BZM1 189 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 BCL2L14Q9BZR8 327 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 RAB1BQ9H0U4 201 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 LRMDAQ9H2I8 198 aa9.6□□□□□ -0.87
SMAD4-211ENST00000590499 EGLN3Q9H6Z9 239 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms