RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SLC6A8P48029 635 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 RFX2P48378 723 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SUCLG1P53597 346 aaKnown RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ACSM2AQ08AH3 577 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ST3GAL4Q11206 333 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 STX4Q12846 297 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ASAH1Q13510 395 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 PON3Q15166 354 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 RAB35Q15286 201 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 CARTPTQ16568 116 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SPANXN2Q5MJ10 180 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 GCNT6Q5T4J0 391 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 CPTPQ5TA50 214 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ACSM2BQ68CK6 577 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 C12orf73Q69YU5 71 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ADNP2Q6IQ32 1131 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 TRIM40Q6P9F5 258 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 AGTRAPQ6RW13 159 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 LCTLQ6UWM7 567 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF621Q6ZSS3 439 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 KRT73Q86Y46 540 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SLC44A2Q8IWA5 706 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 DND1Q8IYX4 353 aaKnown RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 WDSUB1Q8N9V3 476 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 VPS37AQ8NEZ2 397 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 R3HDM4Q96D70 268 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF764Q96H86 408 aaPredicted RBP6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ST6GAL2Q96JF0 529 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SFXN2Q96NB2 322 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 FOXN4Q96NZ1 517 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 OPALINQ96PE5 141 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 MGLLQ99685 303 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SLC6A7Q99884 636 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SLC30A2Q9BRI3 323 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 FUZQ9BT04 418 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 NUAK2Q9H093 628 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 HHATLQ9HCP6 504 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 MYNNQ9NPC7 610 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 CBLN4Q9NTU7 201 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ACER3Q9NUN7 267 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 MED29Q9NX70 200 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SH3BP4Q9P0V3 963 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 SEC14L4Q9UDX3 406 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 FBXL2Q9UKC9 423 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 STUB1Q9UNE7 303 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 ERVK-19Q9WJR5 959 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 N6AMT1Q9Y5N5 214 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 V9GYH0 126 aa6.71□□□□□ -1.34
SMAD4-209ENST00000589941 RYR1P21817 5038 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF670-ZNF695F2Z2N8 137 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 ABCD4O14678 606 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 TP53I11O14683 189 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 PIN1P1O15428 100 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 PCDH7O60245 1069 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 CTNSO60931 367 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 PRKRAO75569 313 aaKnown RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 NXPH3O95157 252 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 IFNA14P01570 189 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 HLA-DQB1P01920 261 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 HIST1H2AGP0C0S8 130 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 PSMB1P20618 241 aaKnown RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 HIST1H2ADP20671 130 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 GTF2E2P29084 291 aaKnown RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 TNFSF8P32971 234 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 AHRP35869 848 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 EFNA4P52798 201 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 CRISP1P54107 249 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 PRKAG1P54619 331 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 SLC37A1P57057 533 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 CDC42P60953 191 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 UBA52P62987 128 aaKnown RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 PSPHP78330 225 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 IRF8Q02556 426 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 P2RY6Q15077 328 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF79Q15937 498 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 NNATQ16517 81 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 ZSWIM7Q19AV6 140 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 GLYR1Q49A26 553 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 ATAD3CQ5T2N8 411 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 THOC7Q6I9Y2 204 aaKnown RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 FAM71E1Q6IPT2 247 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 C11orf87Q6NUJ2 197 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 GALNT10Q86SR1 603 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 THOC6Q86W42 341 aaKnown RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 KRT78Q8N1N4 520 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 STX19Q8N4C7 294 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 CLDN22Q8N7P3 220 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 NTN5Q8WTR8 489 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-209ENST00000589941 RASSF5Q8WWW0 418 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 NEIL2Q969S2 332 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 MS4A6EQ96DS6 147 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 Q96MT0 163 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 OR5M11Q96RB7 305 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 NIPSNAP1Q9BPW8 284 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 SOSTQ9BQB4 213 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 H2AFJQ9BTM1 129 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 BARHL1Q9BZE3 327 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 SRRQ9GZT4 340 aa6.7□□□□□ -1.34
SMAD4-209ENST00000589941 C6orf62Q9GZU0 229 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms