RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 SPATC1Q76KD6 591 aa15.35■□□□□ 0.05
CXXC1-212ENST00000589940 UBE2J2Q8N2K1 259 aa15.35■□□□□ 0.05
CXXC1-212ENST00000589940 MALT1Q9UDY8 824 aa15.35■□□□□ 0.05
CXXC1-212ENST00000589940 SF3B6Q9Y3B4 125 aaKnown RBP15.35■□□□□ 0.05
CXXC1-212ENST00000589940 CACNA1CQ13936 2221 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 HOXD4P09016 255 aaPredicted RBP15.34■□□□□ 0.05
CXXC1-212ENST00000589940 B4GALT1P15291 398 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 PSMB10P40306 273 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 TGM4P49221 684 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 CDK5R1Q15078 307 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 NRN1LQ496H8 165 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 ARL9Q6T311 187 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 GFRALQ6UXV0 394 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 CFAP77Q6ZQR2 320 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 RNF166Q96A37 237 aaPredicted RBP15.34■□□□□ 0.05
CXXC1-212ENST00000589940 SLAMF6Q96DU3 332 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 STUB1Q9UNE7 303 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 FAM215AQ9Y5M1 114 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 ATRXP46100 2492 aa15.34■□□□□ 0.05
CXXC1-212ENST00000589940 OGG1O15527 345 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 ZNF254O75437 659 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 RPP14O95059 124 aaKnown RBP15.33■□□□□ 0.05
CXXC1-212ENST00000589940 CD53P19397 219 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 LSM3P62310 102 aaKnown RBP15.33■□□□□ 0.05
CXXC1-212ENST00000589940 RPS25P62851 125 aaKnown RBP15.33■□□□□ 0.05
CXXC1-212ENST00000589940 AQP6Q13520 282 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 FBXW9Q5XUX1 488 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 SEM1Q6ZVN7 128 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 ABHD12BQ7Z5M8 362 aaPredicted RBP15.33■□□□□ 0.05
CXXC1-212ENST00000589940 LRRC18Q8N456 261 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 TMEM203Q969S6 136 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 SMIM19Q96E16 107 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 CHCHD6Q9BRQ6 235 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 CXorf56Q9H5V9 222 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 PRSS50Q9UI38 385 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 LRP12Q9Y561 859 aa15.33■□□□□ 0.05
CXXC1-212ENST00000589940 RP1L1Q8IWN7 2480 aaPredicted RBP15.33■□□□□ 0.04
CXXC1-212ENST00000589940 LOC100506127A0A0U1RQW1 187 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 LRRTM2O43300 516 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 ATE1O95260 518 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 CST2P09228 141 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 OPRL1P41146 370 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 CRYBB2P43320 205 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 KIR2DL2P43627 348 aaPredicted RBP15.33■□□□□ 0.04
CXXC1-212ENST00000589940 RIDAP52758 137 aaKnown RBP15.33■□□□□ 0.04
CXXC1-212ENST00000589940 FAPQ12884 760 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 RHOUQ7L0Q8 258 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 SLC22A24Q8N4F4 322 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 CNEP1R1Q8N9A8 125 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 OR10S1Q8NGN2 331 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 FREM1Q5H8C1 2179 aa15.33■□□□□ 0.04
CXXC1-212ENST00000589940 TRIM64BA6NI03 449 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 ERVH48-1M5A8F1 160 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 PRRG2O14669 202 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 SLC22A1O15245 554 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 RER1O15258 196 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 GPX5O75715 221 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 PER3P56645 1201 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 SLC3A1Q07837 685 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 OR7E24Q6IFN5 339 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 TFAP2EQ6VUC0 442 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF813Q6ZN06 617 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 GDPGP1Q6ZNW5 385 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 GJC3Q8NFK1 279 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 OR6K3Q8NGY3 331 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 RPS4Y2Q8TD47 263 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 PGLYRP3Q96LB9 341 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 SH3GL3Q99963 347 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 TMED9Q9BVK6 235 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 TP63Q9H3D4 680 aaPredicted RBP15.32■□□□□ 0.04
CXXC1-212ENST00000589940 CENPMQ9NSP4 180 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 DOCK7Q96N67 2140 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 TRBV2A0A0J9YWF9 115 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 TTLL8A6PVC2 850 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF878C9JN71 531 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 H2BFMP0C1H6 154 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 NANOS3P60323 173 aaKnown RBP15.32■□□□□ 0.04
CXXC1-212ENST00000589940 VBP1P61758 197 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 NCS1P62166 190 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 ARF1P84077 181 aaKnown RBP15.32■□□□□ 0.04
CXXC1-212ENST00000589940 CD200R1LQ6Q8B3 271 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF627Q7L945 461 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 HSD17B8Q92506 261 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 FBXO17Q96EF6 278 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 ZNF835Q9Y2P0 537 aa15.32■□□□□ 0.04
CXXC1-212ENST00000589940 SLC19A2O60779 497 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 FARS2O95363 451 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 HLA-DPB1P04440 258 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 CD1AP06126 327 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 EDN3P14138 238 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 TIMP3P35625 211 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 GDI2P50395 445 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 HIST1H3AP68431 136 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 FOXF2Q12947 444 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 EIF2S3LQ2VIR3 472 aaKnown RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 SOWAHCQ53LP3 525 aaPredicted RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 HIST2H3PS2Q5TEC6 136 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 HIST2H3AQ71DI3 136 aa15.31■□□□□ 0.04
CXXC1-212ENST00000589940 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.31■□□□□ 0.04
CXXC1-212ENST00000589940 GHSRQ92847 366 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms