RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, human

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX1-206	ENST00000589760	NUAK2	Q9H093	628 aa		12.51	□□□□□ -0.41
RFX1-206	ENST00000589760	RERGL	Q9H628	205 aa		12.51	□□□□□ -0.41
RFX1-206	ENST00000589760	POLE4	Q9NR33	117 aa		12.51	□□□□□ -0.41
RFX1-206	ENST00000589760	PMF1-BGLAP	U3KQ54	211 aa		12.51	□□□□□ -0.41
RFX1-206	ENST00000589760	VPS13C	Q709C8	3753 aa		12.51	□□□□□ -0.41
RFX1-206	ENST00000589760	ARRDC5	A6NEK1	342 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760		B9A039	149 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	SHOX	O15266	292 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	HIST1H1C	P16403	213 aa	Known RBP	12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	NR4A1	P22736	598 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	APLNR	P35414	380 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	THBS4	P35443	961 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	SERPINF1	P36955	418 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	ARHGDIA	P52565	204 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	PCBD1	P61457	104 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	COX10	Q12887	443 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	SNTB2	Q13425	540 aa	Known RBP	12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	ADIPOQ	Q15848	244 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	TBC1D28	Q2M2D7	210 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	PABPC1L2A	Q5JQF8	200 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	CLEC12A	Q5QGZ9	265 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	C1orf146	Q5VVC0	180 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	OR4K13	Q8NH42	304 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	SLCO4A1	Q96BD0	722 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	NMNAT3	Q96T66	252 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	CDH20	Q9HBT6	801 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	TBC1D23	Q9NUY8	699 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	PDP1	Q9P0J1	537 aa	Predicted RBP	12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	DNAJB9	Q9UBS3	223 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	COA3	Q9Y2R0	106 aa	Predicted RBP	12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	F8	P00451	2351 aa		12.5	□□□□□ -0.41
RFX1-206	ENST00000589760	C12orf71	A8MTZ7	269 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	EBAG9	O00559	213 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	BHLHE40	O14503	412 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	E2F6	O75461	281 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	CIB2	O75838	187 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	OR4A8	P0C604	315 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	CD99	P14209	185 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	GLRX	P35754	106 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	SNRPD2	P62316	118 aa	Known RBP	12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	PSG4	Q00888	419 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	ENDOG	Q14249	297 aa	Known RBP	12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	EFNB3	Q15768	340 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	MST1L	Q2TV78	715 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	CD300LD	Q6UXZ3	194 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	ASRGL1	Q7L266	308 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	TMEM179B	Q7Z7N9	219 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	OR52E2	Q8NGJ4	325 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	FOXN4	Q96NZ1	517 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	FEV	Q99581	238 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	NIPSNAP1	Q9BPW8	284 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	ZNF416	Q9BWM5	594 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	TSSK6	Q9BXA6	273 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	PLA2G12A	Q9BZM1	189 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	PRR13	Q9NZ81	148 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	B9D1	Q9UPM9	204 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	BAIAP2	Q9UQB8	552 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760	TIMM10B	Q9Y5J6	103 aa		12.49	□□□□□ -0.41
RFX1-206	ENST00000589760		H7C417	338 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	TIPRL	O75663	272 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	SOX14	O95416	240 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	SNAP29	O95721	258 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	SCG5	P05408	212 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	CCL2	P13500	99 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	STOM	P27105	288 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	APEX1	P27695	318 aa	Known RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	CENPA	P49450	140 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	RPS23	P62266	143 aa	Known RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	LSM6	P62312	80 aa	Known RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	SCRN3	Q0VDG4	424 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	RAB35	Q15286	201 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	SLC35F1	Q5T1Q4	408 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	UGT2A3	Q6UWM9	527 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	GLB1L2	Q8IW92	636 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	CPEB3	Q8NE35	698 aa	Known RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	SDR9C7	Q8NEX9	313 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	OR8D4	Q8NGM9	314 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	AKR7L	Q8NHP1	331 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760		Q96MF0	132 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	TSSK2	Q96PF2	358 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	OR2H1	Q9GZK4	316 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	RACGAP1	Q9H0H5	632 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	PLK3	Q9H4B4	646 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	BARX1	Q9HBU1	254 aa	Predicted RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	EMC7	Q9NPA0	242 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	RPRD1B	Q9NQG5	326 aa	Known RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	FBXO9	Q9UK97	447 aa	Predicted RBP	12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	CMAHP	Q9Y471	501 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	FKBP7	Q9Y680	259 aa		12.48	□□□□□ -0.41
RFX1-206	ENST00000589760	DCTN6	O00399	190 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	NDUFS7	O75251	213 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	IGFBP1	P08833	259 aa	Predicted RBP	12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	ANXA8	P13928	327 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	CCNO	P22674	350 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	RAD52	P43351	418 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	AQP6	Q13520	282 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	ZBTB46	Q86UZ6	589 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	OR6V1	Q8N148	313 aa		12.47	□□□□□ -0.41
RFX1-206	ENST00000589760	LNX2	Q8N448	690 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms