RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 AQP6Q13520 282 aa16.72■□□□□ 0.27
TPM4-208ENST00000588410 MARS2Q96GW9 593 aaKnown RBP16.72■□□□□ 0.27
TPM4-208ENST00000588410 IFT27Q9BW83 186 aa16.72■□□□□ 0.27
TPM4-208ENST00000588410 NUAK2Q9H093 628 aa16.72■□□□□ 0.27
TPM4-208ENST00000588410 MUC13Q9H3R2 512 aa16.72■□□□□ 0.27
TPM4-208ENST00000588410 DECR2Q9NUI1 292 aa16.72■□□□□ 0.27
TPM4-208ENST00000588410 POLR1DQ9Y2S0 133 aa16.72■□□□□ 0.27
TPM4-208ENST00000588410 LILRA1O75019 489 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 NCR1O76036 304 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 ABHD16AO95870 558 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 RENP00797 406 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 ATP6V1B2P21281 511 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 NOS3P29474 1203 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 CDKN2AP42771 156 aaKnown RBP16.71■□□□□ 0.27
TPM4-208ENST00000588410 TMEM33P57088 247 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 LSM6P62312 80 aaKnown RBP16.71■□□□□ 0.27
TPM4-208ENST00000588410 CCL8P80075 99 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 TRIP10Q15642 601 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 PTCHD4Q6ZW05 846 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 RFPL4BQ6ZWI9 263 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 DHFR2Q86XF0 187 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 KLF14Q8TD94 323 aaPredicted RBP16.71■□□□□ 0.27
TPM4-208ENST00000588410 OR2J1Q9GZK6 312 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 NKIRAS2Q9NYR9 191 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 PLEK2Q9NYT0 353 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 ASH2LQ9UBL3 628 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 ARFGEF3Q5TH69 2177 aa16.71■□□□□ 0.27
TPM4-208ENST00000588410 TNFRSF11BO00300 401 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 PPIHO43447 177 aaKnown RBP16.7■□□□□ 0.26
TPM4-208ENST00000588410 MPZL1O95297 269 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 NGFP01138 241 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 MPV17P39210 176 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 ZNF81P51508 661 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 TEKQ02763 1124 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 TSPAN31Q12999 210 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 TSTQ16762 297 aaKnown RBP16.7■□□□□ 0.26
TPM4-208ENST00000588410 MBNL2Q5VZF2 373 aaKnown RBP16.7■□□□□ 0.26
TPM4-208ENST00000588410 C1orf94Q6P1W5 598 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 LEG1Q6P5S2 330 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 PGM2L1Q6PCE3 622 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 RINLQ6ZS11 566 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 LINC00471Q8N535 108 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 IPCEF1Q8WWN9 437 aaPredicted RBP16.7■□□□□ 0.26
TPM4-208ENST00000588410 YIPF5Q969M3 257 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 SAMD8Q96LT4 415 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 CYSLTR2Q9NS75 346 aa16.7■□□□□ 0.26
TPM4-208ENST00000588410 ZNF275Q9NSD4 429 aaPredicted RBP16.7■□□□□ 0.26
TPM4-208ENST00000588410 CR1P17927 2039 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 H3BSA7 217 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 ARPC3O15145 178 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 ICMTO60725 284 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 CDC14BO60729 498 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 FAM157CP0CG43 387 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 HNF1AP20823 631 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 GSTM3P21266 225 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 LIPAP38571 399 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 GSSP48637 474 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 CCNIQ14094 377 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 OTPQ5XKR4 325 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 PGBD2Q6P3X8 592 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 VASH1Q7L8A9 365 aaPredicted RBP16.69■□□□□ 0.26
TPM4-208ENST00000588410 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.69■□□□□ 0.26
TPM4-208ENST00000588410 LINC01356Q8N9X3 169 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 NPEPL1Q8NDH3 523 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 OR4K13Q8NH42 304 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 POP5Q969H6 163 aaKnown RBP16.69■□□□□ 0.26
TPM4-208ENST00000588410 NMNAT3Q96T66 252 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 NARFLQ9H6Q4 476 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 SRA1Q9HD15 236 aaKnown RBP16.69■□□□□ 0.26
TPM4-208ENST00000588410 PRPF19Q9UMS4 504 aaKnown RBP16.69■□□□□ 0.26
TPM4-208ENST00000588410 GRIP1Q9Y3R0 1128 aa16.69■□□□□ 0.26
TPM4-208ENST00000588410 SPRY3O43610 288 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 IDH3BO43837 385 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 CCNB2O95067 398 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 HIST1H1CP16403 213 aaKnown RBP16.68■□□□□ 0.26
TPM4-208ENST00000588410 TUBG1P23258 451 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 IGFBP5P24593 272 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 IL2RGP31785 369 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 TRIM25Q14258 630 aaKnown RBP16.68■□□□□ 0.26
TPM4-208ENST00000588410 KCNMB1Q16558 191 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 FAM98BQ52LJ0 330 aaKnown RBP16.68■□□□□ 0.26
TPM4-208ENST00000588410 ZMAT1Q5H9K5 638 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 LCN8Q6JVE9 175 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 ZNF620Q6ZNG0 422 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 OR52L1Q8NGH7 329 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 OR1F12Q8NHA8 337 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 GTF3AQ92664 365 aaKnown RBP16.68■□□□□ 0.26
TPM4-208ENST00000588410 LRGUKQ96M69 825 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 TSSK2Q96PF2 358 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 SOX7Q9BT81 388 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 MAGIXQ9H6Y5 334 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 SAP30LQ9HAJ7 183 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 TUBG2Q9NRH3 451 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 TBCCD1Q9NVR7 557 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 CGGBP1Q9UFW8 167 aaPredicted RBP16.68■□□□□ 0.26
TPM4-208ENST00000588410 B9D1Q9UPM9 204 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 LYVE1Q9Y5Y7 322 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 ABCA1O95477 2261 aa16.68■□□□□ 0.26
TPM4-208ENST00000588410 IGHV1-69-2A0A0G2JMI3 117 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms