RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 XKRYO14609 159 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 TIMM8AO60220 97 aaPredicted RBP12.15□□□□□ -0.46
VMP1-206ENST00000587945 DOK2O60496 412 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 ICMTO60725 284 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 CCDC22O60826 627 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 MDH1P40925 334 aaKnown RBP12.15□□□□□ -0.46
VMP1-206ENST00000587945 HTR5AP47898 357 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 ARHGDIAP52565 204 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 MTX3Q5HYI7 312 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 RRM2BQ7LG56 351 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 SYT9Q86SS6 491 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 FAM156AQ8NDB6 213 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 SEMA6DQ8NFY4 1073 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 SLC7A6Q92536 515 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 GAL3ST1Q99999 423 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 TMPRSS13Q9BYE2 586 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 EGLN1Q9GZT9 426 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 EGFL7Q9UHF1 273 aa12.15□□□□□ -0.46
VMP1-206ENST00000587945 H3BSA7 217 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 SGCEO43556 437 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 PTP4A3O75365 173 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 DIRAS1O95057 198 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 H1F0P07305 194 aaKnown RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 ADRA2CP18825 462 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 PSME3P61289 254 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 TNFAIP6P98066 277 aaPredicted RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 C1orf94Q6P1W5 598 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 ARL9Q6T311 187 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 VASH1Q7L8A9 365 aaPredicted RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 CYP4Z1Q86W10 505 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 C1orf174Q8IYL3 243 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 FAM86B1Q8N7N1 296 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 DCLRE1CQ96SD1 692 aaKnown RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 SYT4Q9H2B2 425 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 NDUFAF4Q9P032 175 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 NDRG4Q9ULP0 352 aaKnown RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 SIGLEC7Q9Y286 467 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 TMEM5Q9Y2B1 443 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
VMP1-206ENST00000587945 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
VMP1-206ENST00000587945 A0A0G2JMP0 313 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 TRBV4-1A0A0J9YWV2 114 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 A0A0X1KG70 313 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 A0A1W2PRQ8 180 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 SOCS2O14508 198 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 SLC16A7O60669 478 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 NDUFB2O95178 105 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 GPANK1O95872 356 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 CD55P08174 381 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 ADH4P08319 380 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 COX5BP10606 129 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 EPHA1P21709 976 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 LIPAP38571 399 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 OMPP47874 163 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 LIMS1P48059 325 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 ERFP50548 548 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 LCN2P80188 198 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 DBPQ10586 325 aaPredicted RBP12.13□□□□□ -0.47
VMP1-206ENST00000587945 CDK5R2Q13319 367 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 DGCR6Q14129 220 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 SEC23BQ15437 767 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 HSP90B2PQ58FF3 399 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 Q6ZR03 302 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.13□□□□□ -0.47
VMP1-206ENST00000587945 OR4M2Q8NGB6 313 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 GPA33Q99795 319 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 ANKRD19PQ9H560 264 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 TBCCD1Q9NVR7 557 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 ABCD2Q9UBJ2 740 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 ASH2LQ9UBL3 628 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
VMP1-206ENST00000587945 ZDHHC8Q9ULC8 765 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 FAM32AQ9Y421 112 aaKnown RBP12.13□□□□□ -0.47
VMP1-206ENST00000587945 IER3IP1Q9Y5U9 82 aa12.13□□□□□ -0.47
VMP1-206ENST00000587945 A0A0A6YYJ9 748 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 AHCYL1O43865 530 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 KHDRBS3O75525 346 aaKnown RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 DBHP09172 617 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 SBK2P0C263 348 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 GSTM3P21266 225 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 ZFP36P26651 326 aaKnown RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 SDHAP31040 664 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 FXYD6P3P58550 94 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 SLC3A1Q07837 685 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 ZMAT1Q5H9K5 638 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 GLYATQ6IB77 296 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 GLB1L2Q8IW92 636 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 RNF148Q8N7C7 305 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms