RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
VMP1-204ENST00000587259 DCSTAMPQ9H295 470 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 OR51V1Q9H2C8 321 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 TXNIPQ9H3M7 391 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 PIGMQ9H3S5 423 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 ADGRL4Q9HBW9 690 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 HMG20AQ9NP66 347 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 FANCFQ9NPI8 374 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 DKKL1Q9UK85 242 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 MXRA5Q9NR99 2828 aa6.91□□□□□ -1.3
VMP1-204ENST00000587259 RAI1Q7Z5J4 1906 aaPredicted RBP6.91□□□□□ -1.3
VMP1-204ENST00000587259 TEX13CA0A0J9YWL9 993 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 LOC100506127A0A0U1RQW1 187 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 CCDC182A6NF36 153 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 H3BML4 177 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 MSTNO14793 375 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 RNF13O43567 381 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 CRLF1O75462 422 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 AQP8O94778 261 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 GOSR1O95249 250 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 SLC2A10O95528 541 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 SERPINA3P01011 423 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 LIMS3P0CW19 117 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 LIMS4P0CW20 117 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 SPI1P17947 270 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 CFL1P23528 166 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 GADD45AP24522 165 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 DPP4P27487 766 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 SRD5A2P31213 254 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 FGF9P31371 208 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 AQP2P41181 271 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 DIO1P49895 249 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 ETV1P50549 477 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 RPL27P61353 136 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 ERVK-25P63136 954 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 PUDPQ08623 228 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 FOXF1Q12946 379 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 DCTN2Q13561 401 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 TSC22D1Q15714 1073 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 TOMM34Q15785 309 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 MOGQ16653 247 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 LEG1Q6P5S2 330 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 ZNF322Q6U7Q0 402 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 PRSS57Q6UWY2 283 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 H1FNTQ75WM6 255 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 FAM220AQ7Z4H9 259 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 BCDIN3DQ7Z5W3 292 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 KCTD20Q7Z5Y7 419 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 GTPBP8Q8N3Z3 284 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 LRRC17Q8N6Y2 441 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 ARIH2OSQ8N7S6 290 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 NPEPL1Q8NDH3 523 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 OR10H4Q8NGA5 316 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 OR4K13Q8NH42 304 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 FNDC9Q8TBE3 224 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 DYNC2LI1Q8TCX1 351 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 IGFBPL1Q8WX77 278 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 AP3S1Q92572 193 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 THRSPQ92748 146 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 NEUROG1Q92886 237 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 KISS1RQ969F8 398 aaPredicted RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 ZFP3Q96NJ6 502 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 OR5M11Q96RB7 305 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 UCN2Q96RP3 112 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 NPAS1Q99742 590 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 PTDSS2Q9BVG9 487 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 GSX2Q9BZM3 304 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 NMNAT2Q9BZQ4 307 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 MMP27Q9H306 513 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 ASB6Q9NWX5 421 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 TAS2R16Q9NYV7 291 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 MED11Q9P086 117 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 VDAC3Q9Y277 283 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 TRAPPC4Q9Y296 219 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 MRPS18CQ9Y3D5 142 aaKnown RBP6.9□□□□□ -1.3
VMP1-204ENST00000587259 ADAM18Q9Y3Q7 739 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 FKBP7Q9Y680 259 aa6.9□□□□□ -1.3
VMP1-204ENST00000587259 ANK3Q12955 4377 aaKnown RBP6.9□□□□□ -1.31
VMP1-204ENST00000587259 NBEAL1Q6ZS30 2694 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PNMA8CA0A1B0GUJ8 204 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 FTCDNL1E5RQL4 147 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF670-ZNF695F2Z2N8 137 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 C16orf97H3BN30 126 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PLPP3O14495 311 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 EIF1BO60739 113 aaKnown RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 NDUFS7O75251 213 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 VAMP5O95183 116 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PMS2P2O95744 297 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 IL1AP01583 271 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 CD1AP06126 327 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 TACSTD2P09758 323 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 TFPIP10646 304 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 AHCYP23526 432 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 GRPRP30550 384 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 S100A5P33763 92 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms