RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 APOFQ13790 326 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 KEAP1Q14145 624 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 PCK2Q16822 640 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 TBC1D28Q2M2D7 210 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF672Q499Z4 452 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-204ENST00000586558 AADACL4Q5VUY2 407 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 SLC18B1Q6NT16 456 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF511Q8NB15 262 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF555Q8NEP9 628 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 BBS1Q8NFJ9 593 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 KBTBD8Q8NFY9 601 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 OR4F15Q8NGB8 312 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 IL4I1Q96RQ9 567 aa16.62■□□□□ 0.25
DDX39A-204ENST00000586558 H2AFY2Q9P0M6 372 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-204ENST00000586558 LOC100130705A0A1B0GUX0 176 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 TVP23AA6NH52 213 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 SLC22A31A6NKX4 558 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 ATP6V1G2-DDX39BF2Z307 99 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 HS3ST1O14792 307 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 DOK2O60496 412 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 PLAUP00749 431 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 STOMP27105 288 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 APEX1P27695 318 aaKnown RBP16.61■□□□□ 0.25
DDX39A-204ENST00000586558 CDH11P55287 796 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 RAB35Q15286 201 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 OTPQ5XKR4 325 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF774Q6NX45 483 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 CPEB3Q8NE35 698 aaKnown RBP16.61■□□□□ 0.25
DDX39A-204ENST00000586558 AKR7LQ8NHP1 331 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 INTS14Q96SY0 518 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 HDHD2Q9H0R4 259 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 VCX3BQ9H321 246 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 PLEKHF2Q9H8W4 249 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 CDH20Q9HBT6 801 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 PLEK2Q9NYT0 353 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 POU2F3Q9UKI9 436 aa16.61■□□□□ 0.25
DDX39A-204ENST00000586558 RER1O15258 196 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 MPZL2O60487 215 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 ATP6V1G2O95670 118 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF35P13682 527 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 CALCRP30988 508 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 GDI2P50395 445 aaKnown RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 SNRPGP62308 76 aaKnown RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 SLC25A30Q5SVS4 291 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 TTC23Q5W5X9 447 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 LYPD4Q6UWN0 246 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 MEPCEQ7L2J0 689 aaKnown RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 VASH1Q7L8A9 365 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 SHFQ7M4L6 423 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 TIGD4Q8IY51 512 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 AKAP1Q92667 903 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 RFKQ969G6 155 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 ZMYND19Q96E35 227 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 TEAD3Q99594 435 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 WDR76Q9H967 626 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 GDF2Q9UK05 429 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 EDARQ9UNE0 448 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 SPEF1Q9Y4P9 236 aa16.6■□□□□ 0.25
DDX39A-204ENST00000586558 HRNRQ86YZ3 2850 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-204ENST00000586558 FBN2P35556 2912 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 APCP25054 2843 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 CCDC182A6NF36 153 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 OR6C6A6NF89 314 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 H0YJX3 145 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF593O00488 134 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-204ENST00000586558 SPARCP09486 303 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 HTR5AP47898 357 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 GALK2Q01415 458 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 ECH1Q13011 328 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 ELFN2Q5R3F8 820 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 CORO6Q6QEF8 472 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 C20orf204Q6ZNR8 217 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 ERI1Q8IV48 349 aaKnown RBP16.59■□□□□ 0.25
DDX39A-204ENST00000586558 LINC00346Q8IVM7 164 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 DHRSXQ8N5I4 330 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 ZNF611Q8N823 705 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 NUP37Q8NFH4 326 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 LILRB1Q8NHL6 650 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-204ENST00000586558 IPCEF1Q8WWN9 437 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-204ENST00000586558 FBXW5Q969U6 566 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 POM121L2Q96KW2 1035 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 APOL4Q9BPW4 351 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 ATP23Q9Y6H3 246 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 CADP27708 2225 aa16.59■□□□□ 0.25
DDX39A-204ENST00000586558 LOC100509620A0A075B734 347 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 SYNGR3O43761 229 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 NR4A1P22736 598 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 PCSK6P29122 969 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 KRTAP10-9P60411 292 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 HGFACQ04756 655 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 TMED1Q13445 227 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 GGTLC2Q14390 218 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 CCDC92Q53HC0 331 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-204ENST00000586558 MEDAGQ5VYS4 303 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 UNQ6126/PRO20091Q6UXV3 157 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 CFAP77Q6ZQR2 320 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 ZNF454Q8N9F8 522 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 OR6N2Q8NGY6 317 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 OR1F12Q8NHA8 337 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 NRG4Q8WWG1 115 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms