RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 TSC22D1Q15714 1073 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 ETFDHQ16134 617 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 TBRG1Q3YBR2 411 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 KLHL22Q53GT1 634 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 TEX30Q5JUR7 227 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 SLC16A14Q7RTX9 510 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 ZNF454Q8N9F8 522 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 OR2AJ1Q8NGZ0 328 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 BCL2L2Q92843 193 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-205ENST00000586477 MBD6Q96DN6 1003 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 ZNF837Q96EG3 531 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-205ENST00000586477 CNBD2Q96M20 576 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 ACTR6Q9GZN1 396 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 MARCH7Q9H992 704 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 CCNB1IP1Q9NPC3 277 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 NGBQ9NPG2 151 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 BLOC1S6Q9UL45 172 aa14.06□□□□□ -0.16
ATG4D-205ENST00000586477 DSCAMO60469 2012 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 CADP27708 2225 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 CASKO14936 926 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 ENTPD6O75354 484 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 RAF1P04049 648 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 CLUP10909 449 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 CAPZA2P47755 286 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 ACTC1P68032 377 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 ACTA1P68133 377 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 CDK5R2Q13319 367 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 LINC01590Q5TEZ4 76 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 TMEM53Q6P2H8 277 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 BBS1Q8NFJ9 593 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 OR51L1Q8NGJ5 315 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 FBLIM1Q8WUP2 373 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 C11orf40Q8WZ69 217 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 UBE2FQ969M7 185 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 NABP1Q96AH0 204 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 PIK3IP1Q96FE7 263 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 MRPL48Q96GC5 212 aaKnown RBP14.05□□□□□ -0.16
ATG4D-205ENST00000586477 YIPF3Q9GZM5 350 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 SLC17A5Q9NRA2 495 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 SCN3BQ9NY72 215 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 COMMD3-BMI1R4GMX3 469 aa14.05□□□□□ -0.16
ATG4D-205ENST00000586477 NIPBLQ6KC79 2804 aaeCLIP14.05□□□□□ -0.16
ATG4D-205ENST00000586477 ARID1AO14497 2285 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 FAM171A2A8MVW0 826 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 PHYHO14832 338 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
ATG4D-205ENST00000586477 PTHP01270 115 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 CDAP32320 146 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 PLP2Q04941 152 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 RAB40BQ12829 278 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 GSG1Q2KHT4 349 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 SLC16A9Q7RTY1 509 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 TGIF2LYQ8IUE0 185 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 KRTAP1-3Q8IUG1 177 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 ERI1Q8IV48 349 aaKnown RBP14.04□□□□□ -0.16
ATG4D-205ENST00000586477 ALDH16A1Q8IZ83 802 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 FAM169BQ8N8A8 192 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 GJC3Q8NFK1 279 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 CNIH3Q8TBE1 160 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 ZMYND19Q96E35 227 aaPredicted RBP14.04□□□□□ -0.16
ATG4D-205ENST00000586477 C1orf198Q9H425 327 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 PLCXD1Q9NUJ7 323 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 LRRC42Q9Y546 428 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 TIMM10BQ9Y5J6 103 aa14.04□□□□□ -0.16
ATG4D-205ENST00000586477 A0A096LPE4 126 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 A0A1W2PPZ6 126 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 CCDC182A6NF36 153 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 EFCAB10A6NFE3 127 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 WBP4O75554 376 aaKnown RBP14.03□□□□□ -0.16
ATG4D-205ENST00000586477 RAB36O95755 333 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 SPARCP09486 303 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 CCDC159P0C7I6 412 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 DBTP11182 482 aaKnown RBP14.03□□□□□ -0.16
ATG4D-205ENST00000586477 FOXG1P55316 489 aaPredicted RBP14.03□□□□□ -0.16
ATG4D-205ENST00000586477 ZNF91Q05481 1191 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 PPA1Q15181 289 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 PCK2Q16822 640 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 DEFB113Q30KQ7 82 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 SEZ6L2Q6UXD5 910 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 RHOUQ7L0Q8 258 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 SKA3Q8IX90 412 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 TIGD4Q8IY51 512 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 LRRC18Q8N456 261 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 ZNF511Q8NB15 262 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 OR6N2Q8NGY6 317 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 APH1BQ8WW43 257 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 IPCEF1Q8WWN9 437 aaPredicted RBP14.03□□□□□ -0.16
ATG4D-205ENST00000586477 RNFT2Q96EX2 444 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 TMUB1Q9BVT8 246 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 ZNF416Q9BWM5 594 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 RNF121Q9H920 327 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 WDR76Q9H967 626 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 MRPS18AQ9NVS2 196 aaKnown RBP14.03□□□□□ -0.16
ATG4D-205ENST00000586477 CNOT2Q9NZN8 540 aaKnown RBP14.03□□□□□ -0.16
ATG4D-205ENST00000586477 LRCH1Q9Y2L9 728 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 TPRKBQ9Y3C4 175 aa14.03□□□□□ -0.16
ATG4D-205ENST00000586477 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.02□□□□□ -0.17
ATG4D-205ENST00000586477 TVP23AA6NH52 213 aa14.02□□□□□ -0.17
ATG4D-205ENST00000586477 ZNF593O00488 134 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms