RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 HIST2H3AQ71DI3 136 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 THOC3Q96J01 351 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 PTDSS2Q9BVG9 487 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 KCND3Q9UK17 655 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 NPFFR2Q9Y5X5 522 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM235A6NFC5 223 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 FUCA1P04066 466 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 RBP2P50120 134 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CORO6Q6QEF8 472 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TFAP2EQ6VUC0 442 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 WDR88Q6ZMY6 472 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM123Q8N131 208 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR51F2Q8NH61 342 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 PIGMQ9H3S5 423 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 MRPS2Q9Y399 296 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 KPTNQ9Y664 436 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 NHSL1Q5SYE7 1610 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 MN1Q10571 1320 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SBK2P0C263 348 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 HSF1Q00613 529 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 KCNAB1Q14722 419 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 EXT1Q16394 746 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 DUSP6Q16828 381 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR2AE1Q8NHA4 323 aa12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 THAP10Q9P2Z0 257 aaPredicted RBP12.13□□□□□ -0.47
RAB11FIP4-210ENST00000585058 A0A1B0GTW7 788 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SLC2A10O95528 541 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM52BQ4KMG9 183 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ZADH2Q8N4Q0 377 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SIRT6Q8N6T7 355 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SEMA4CQ9C0C4 833 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CTSFQ9UBX1 484 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 K7ESM1 405 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 PIPP12273 146 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 DGCR2P98153 550 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TAF9Q16594 264 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SPANXN5Q5MJ07 72 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR2L13Q8N349 312 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR1M1Q8NGA1 313 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 EIF4E2O60573 245 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 GLAP06280 429 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 FABP1P07148 127 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 NTF3P20783 257 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CSN1S1P47710 185 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ZNF718Q3SXZ3 478 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 WFDC5Q8TCV5 224 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 EGLN1Q9GZT9 426 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 KIR3DX1Q9H7L2 352 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 NIT2Q9NQR4 276 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 MBNL1Q9NR56 388 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 FLVCR1Q9Y5Y0 555 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 BTG1P62324 171 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 UBE2IP63279 158 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 LCN15Q6UWW0 184 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 C11orf40Q8WZ69 217 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 FBXL4Q9UKA2 621 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ANKRD61A6NGH8 418 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SSSCA1O60232 199 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 QDPRP09417 244 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TGM1P22735 817 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CISD2Q8N5K1 135 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SLC37A2Q8TED4 501 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ISL2Q96A47 359 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 PLA2G12AQ9BZM1 189 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SPACA1Q9HBV2 294 aa12.12□□□□□ -0.47
RAB11FIP4-210ENST00000585058 AQP7P3A6NL99 342 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 H7BYZ3 331 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SIRPB1O00241 398 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ABCD4O14678 606 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CHEK1O14757 476 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 HIST1H1CP16403 213 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 JUNBP17275 347 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 MLF2Q15773 248 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM207Q6UWW9 146 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM43Q9BTV4 400 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 MARCH5Q9NX47 278 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 CLCF1Q9UBD9 225 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM129A0AVI4 362 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 UMAD1C9J7I0 102 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ADH4P08319 380 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 GIPP09681 153 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 Q6ZNX1 250 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR4F5Q8NH21 305 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SLC25A43Q8WUT9 341 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 SLAMF6Q96DU3 332 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 TMEM231Q9H6L2 316 aa12.11□□□□□ -0.47
RAB11FIP4-210ENST00000585058 ASH2LQ9UBL3 628 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms