RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	FAM192A	Q9GZU8	254 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	SAV1	Q9H4B6	383 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	UBE2Z	Q9H832	354 aa	Predicted RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	ANKRA2	Q9H9E1	313 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	GPATCH2L	Q9NWQ4	482 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	TRMT112	Q9UI30	125 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	KCNE3	Q9Y6H6	103 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	AKNA	Q7Z591	1439 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	GPATCH8	Q9UKJ3	1502 aa	Known RBP	2.56	□□□□□ -2
NUP85-222	ENST00000583569	NAV2	Q8IVL1	2488 aa		2.56	□□□□□ -2
NUP85-222	ENST00000583569	BPTF	Q12830	3046 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	CTAGE15	A4D2H0	777 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	TRIM64C	A6NLI5	447 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	LYRM9	A8MSI8	78 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	SIRPB1	O00241	398 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	RAD51B	O15315	384 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	FKBP6	O75344	327 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	ERLIN1	O75477	346 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	PABPC4L	P0CB38	370 aa	Known RBP	2.55	□□□□□ -2
NUP85-222	ENST00000583569	TCN2	P20062	427 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	CX3CR1	P49238	355 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	RAB10	P61026	200 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	STXBP1	P61764	594 aa	Known RBP	2.55	□□□□□ -2
NUP85-222	ENST00000583569	TGM3	Q08188	693 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	SF3A2	Q15428	464 aa	Known RBP	2.55	□□□□□ -2
NUP85-222	ENST00000583569	HSP90AB3P	Q58FF7	597 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	C22orf42	Q6IC83	251 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	KRTAP5-4	Q6L8H1	288 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	PRMT9	Q6P2P2	845 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	MBOAT1	Q6ZNC8	495 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	CTAGE6	Q86UF2	777 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	CMTM1	Q8IZ96	169 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	ZFP41	Q8N8Y5	198 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	ECHDC3	Q96DC8	303 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	RBMXL1	Q96E39	390 aa	Known RBP	2.55	□□□□□ -2
NUP85-222	ENST00000583569	SEH1L	Q96EE3	360 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	C20orf24	Q9BUV8	137 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	TMEM9B	Q9NQ34	198 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	SIRT7	Q9NRC8	400 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	OPN4	Q9UHM6	478 aa		2.55	□□□□□ -2
NUP85-222	ENST00000583569	IGKV6-21	A0A0C4DH24	114 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	TRBV11-1	A0A0K0K1C0	115 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569		A0A1W2PQ67	120 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	OR2AG2	A6NM03	316 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	EIF3H	O15372	352 aa	Known RBP eCLIP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	RBFOX2	O43251	390 aa	Known RBP eCLIP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	RDH16	O75452	317 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	FOXH1	O75593	365 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	H6PD	O95479	791 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	OR56A5	P0C7T3	313 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	MUC1	P15941	1255 aa	Predicted RBP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	GGT1	P19440	569 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	EIF3E	P60228	445 aa	Known RBP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	UBE2N	P61088	152 aa	Known RBP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	CDH17	Q12864	832 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	MOBP	Q13875	183 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	QPRT	Q15274	297 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	IRF4	Q15306	451 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	CHRNA6	Q15825	494 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	SNRNP35	Q16560	246 aa	Known RBP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	ORMDL2	Q53FV1	153 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	SMUG1	Q53HV7	270 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	LRRC66	Q68CR7	880 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	NTM-AS1	Q6ZSK4	140 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	CENPQ	Q7L2Z9	268 aa	Predicted RBP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	CALHM1	Q8IU99	346 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	ZNF561	Q8N587	486 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	METTL13	Q8N6R0	699 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	COQ8A	Q8NI60	647 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	EEF1AKMT3	Q96AZ1	226 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	GALNT14	Q96FL9	552 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	RSPO3	Q9BXY4	272 aa	Predicted RBP	2.54	□□□□□ -2
NUP85-222	ENST00000583569	KRTAP4-4	Q9BYR3	166 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	SPNS1	Q9H2V7	528 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	NTN4	Q9HB63	628 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	ZNF835	Q9Y2P0	537 aa		2.54	□□□□□ -2
NUP85-222	ENST00000583569	COL4A4	P53420	1690 aa	Predicted RBP	2.53	□□□□□ -2
NUP85-222	ENST00000583569	NINL	Q9Y2I6	1382 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	TMEM223	A0PJW6	202 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	TCP11X1	B4DZS4	312 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	NDUFAB1	O14561	156 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	HMMR	O75330	724 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	AGT	P01019	485 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	KRT14	P02533	472 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	ZNF286B	P0CG31	522 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	DTYMK	P23919	212 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	OTX1	P32242	354 aa	Predicted RBP	2.53	□□□□□ -2
NUP85-222	ENST00000583569	RGS8	P57771	180 aa	Predicted RBP	2.53	□□□□□ -2
NUP85-222	ENST00000583569	LOXL1	Q08397	574 aa	Predicted RBP	2.53	□□□□□ -2
NUP85-222	ENST00000583569	SELENBP1	Q13228	472 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	RCAN2	Q14206	197 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	RCN1	Q15293	331 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	ZNF726P1	Q15940	193 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	XKR4	Q5GH76	650 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	ZNF684	Q5T5D7	378 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569		Q5W150	140 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	CMC1	Q7Z7K0	106 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	WDR86	Q86TI4	376 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	LGI3	Q8N145	548 aa		2.53	□□□□□ -2
NUP85-222	ENST00000583569	OR4C5	Q8NGB2	326 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms