RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 LRRC29Q8WV35 223 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 DNAJC1Q96KC8 554 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 MICU1Q9BPX6 476 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 SPNS1Q9H2V7 528 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 HMG20AQ9NP66 347 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 ZDHHC4Q9NPG8 344 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 ZNF355PQ9NSJ1 428 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 GPATCH2LQ9NWQ4 482 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 TRMT112Q9UI30 125 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 DENND4AQ7Z401 1863 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 SLIT3O75094 1523 aa3.28□□□□□ -1.88
SMARCE1-219ENST00000583294 IGLV1-36A0A0B4J1U3 117 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 TRBV11-1A0A0K0K1C0 115 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 A0A1B0GW55 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 TCP11X1B4DZS4 312 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 L7N2F9 121 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 FOXH1O75593 365 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 AGTP01019 485 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 DUX4L2P0CJ85 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 DUX4L3P0CJ86 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 DUX4L5P0CJ88 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 DUX4L6P0CJ89 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 DUX4L7P0CJ90 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 PSMC3P17980 439 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 CX3CR1P49238 355 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 C21orf59P57076 290 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 RGS8P57771 180 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 CUL2Q13617 745 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF726P1Q15940 193 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 ABCA11PQ4W5N1 156 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 FAM78AQ5JUQ0 283 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 FBXW9Q5XUX1 488 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 H1FOOQ8IZA3 346 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 SAV1Q9H4B6 383 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM185BQ9H7F4 350 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 UBE2ZQ9H832 354 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNRD1Q9P1U0 126 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 DUX4Q9UBX2 424 aa3.27□□□□□ -1.89
SMARCE1-219ENST00000583294 LYRM9A8MSI8 78 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 WARSP23381 471 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 GTF2E2P29084 291 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 CRISP1P54107 249 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 VSX2P58304 361 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 CDH17Q12864 832 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 SF3A2Q15428 464 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 GPR107Q5VW38 600 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 CENPQQ7L2Z9 268 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 CMC1Q7Z7K0 106 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 METTL13Q8N6R0 699 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 NUBPLQ8TB37 319 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 NTAN1Q96AB6 310 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 CHP1Q99653 195 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 EDA2RQ9HAV5 297 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 BEX1Q9HBH7 125 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 WFDC1Q9HC57 220 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 RETNQ9HD89 108 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 OPN4Q9UHM6 478 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF835Q9Y2P0 537 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 KCNE3Q9Y6H6 103 aa3.26□□□□□ -1.89
SMARCE1-219ENST00000583294 COL4A4P53420 1690 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 IGLV1-50A0A075B6I6 118 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 TMEM150BA6NC51 233 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF705GA8MUZ8 300 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 SMKR1H3BMG3 65 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 RAD51BO15315 384 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 EIF4E2O60573 245 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 CLDN11O75508 207 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 VAMP5O95183 116 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 KRT14P02533 472 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 MYL2P10916 166 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 NPY1RP25929 384 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 PMELP40967 661 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 SYKP43405 635 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 UBE2NP61088 152 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 RPS15P62841 145 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 SP4Q02446 784 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 LIPEQ05469 1076 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 MOBPQ13875 183 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 IDI1Q13907 227 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 ORMDL2Q53FV1 153 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 SMUG1Q53HV7 270 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF684Q5T5D7 378 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 C12orf54Q6X4T0 127 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 OR10AD1Q8NGE0 317 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 MRGPRFQ96AM1 343 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 NEURL3Q96EH8 262 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 ZNF382Q96SR6 550 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 CCDC59Q9P031 241 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 GCNT4Q9P109 453 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 SLC17A4Q9Y2C5 497 aa3.25□□□□□ -1.89
SMARCE1-219ENST00000583294 A0A075B6Q4 140 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 SGK1O00141 431 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 NDUFAB1O14561 156 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 RBFOX2O43251 390 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 CHST1O43916 411 aa3.24□□□□□ -1.89
SMARCE1-219ENST00000583294 CDH16O75309 829 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms