RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 IGKV3-15P01624 115 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 HLA-HP01893 362 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 SPARCP09486 303 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 ZNF32P17041 273 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 DCKP27707 260 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 HOXC12P31275 282 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 ATP6V1E1P36543 226 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 NAA10P41227 235 aaPredicted RBP10.04□□□□□ -0.8
GGA3-211ENST00000582232 RAB1AP62820 205 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 SCRN3Q0VDG4 424 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 TAB1Q15750 504 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 GSG1Q2KHT4 349 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 RNLSQ5VYX0 342 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 TMEM53Q6P2H8 277 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 SLC35F2Q8IXU6 374 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 ZNF786Q8N393 782 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 OR4F15Q8NGB8 312 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 OR52I1Q8NGK6 324 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 OR2AJ1Q8NGZ0 328 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 ST7LQ8TDW4 575 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 SSC4DQ8WTU2 575 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 ASB17Q8WXJ9 295 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 MUCL1Q96DR8 90 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 MAP6Q96JE9 813 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 SIGLEC11Q96RL6 698 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 C1orf198Q9H425 327 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 CCNB1IP1Q9NPC3 277 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 INPP5EQ9NRR6 644 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 ATPIF1Q9UII2 106 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 GDF2Q9UK05 429 aaPredicted RBP10.04□□□□□ -0.8
GGA3-211ENST00000582232 FBXL3Q9UKT7 428 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 BLOC1S6Q9UL45 172 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 DIMT1Q9UNQ2 313 aaKnown RBP10.04□□□□□ -0.8
GGA3-211ENST00000582232 KLF2Q9Y5W3 355 aaPredicted RBP10.04□□□□□ -0.8
GGA3-211ENST00000582232 RTTNQ86VV8 2226 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
GGA3-211ENST00000582232 SPTAN1Q13813 2472 aaKnown RBP10.04□□□□□ -0.8
GGA3-211ENST00000582232 FLNBO75369 2602 aaKnown RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 MRPS14O60783 128 aaKnown RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 RAB36O95755 333 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 LYNP07948 512 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 MRPL3P09001 348 aaKnown RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 RNF224P0DH78 156 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 COX5BP10606 129 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 CBR1P16152 277 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 IGFBP2P18065 325 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 GRNP28799 593 aaKnown RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 GABARAPL2P60520 117 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 PSG4Q00888 419 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ROM1Q03395 351 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 PPA1Q15181 289 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 CCDC92Q53HC0 331 aaPredicted RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 OTPQ5XKR4 325 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 CORO6Q6QEF8 472 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 DEGS2Q6QHC5 323 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 SEZ6L2Q6UXD5 910 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 C22orf34Q6ZV56 151 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 DCXRQ7Z4W1 244 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 MDP1Q86V88 176 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 LINC00346Q8IVM7 164 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ALDH16A1Q8IZ83 802 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ACBD7Q8N6N7 88 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ACBD4Q8NC06 268 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ZNF540Q8NDQ6 660 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 RNF133Q8WVZ7 376 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 MYDGFQ969H8 173 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 MYCBPQ99417 103 aaPredicted RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 ZNF649Q9BS31 505 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 RHNO1Q9BSD3 238 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 ABHD6Q9BV23 337 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 OR2H1Q9GZK4 316 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 HDHD2Q9H0R4 259 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 WNT5BQ9H1J7 359 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 NOX3Q9HBY0 568 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 PNRC2Q9NPJ4 139 aaKnown RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 NPDC1Q9NQX5 325 aaPredicted RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
GGA3-211ENST00000582232 NDRG3Q9UGV2 375 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 LAMP5Q9UJQ1 280 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 COPS3Q9UNS2 423 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 MYRFQ9Y2G1 1151 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
GGA3-211ENST00000582232 A0A1W2PQL4 384 aaPredicted RBP10.02□□□□□ -0.81
GGA3-211ENST00000582232 OR6C6A6NF89 314 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 ZNF670-ZNF695F2Z2N8 137 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 RER1O15258 196 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 SGCEO43556 437 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 SYNGR3O43761 229 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 APOL3O95236 402 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 PTHP01270 115 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 IGLV1-44P01699 117 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 CDK1P06493 297 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 THBDP07204 575 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 PATE4P0C8F1 98 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 CD79AP11912 226 aa10.02□□□□□ -0.81
GGA3-211ENST00000582232 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms