RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 STT3BQ8TCJ2 826 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 HGDQ93099 445 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 FAM46BQ96A09 425 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM138Q9NPI0 162 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 ZC4H2Q9NQZ6 224 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 AKAP7Q9P0M2 348 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 DHDHQ9UQ10 334 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 MRPS18BQ9Y676 258 aaKnown RBP9.41□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM14AQ9Y6G1 99 aa9.41□□□□□ -0.9
TOP3A-209ENST00000580095 COL4A2P08572 1712 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM272A0A1B0GTI8 110 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 A0A1B0GUH1 482 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 A0A1B0GX78 115 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 CPED1A4D0V7 1026 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 A8MVM7 634 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 I3L521 148 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 FADS1O60427 444 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 CREBL2O60519 120 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 HOXD4P09016 255 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 SRFP11831 508 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TSPAN7P41732 249 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TDGQ13569 410 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 RAB11BQ15907 218 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF124Q15973 351 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM225Q6GV28 225 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 C17orf107Q6ZR85 190 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TMED4Q7Z7H5 227 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 ASB5Q8WWX0 329 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 CMBLQ96DG6 245 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 SLC25A44Q96H78 314 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 CMKLR1Q99788 373 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 CLEC4MQ9H2X3 399 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TXNIPQ9H3M7 391 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 M0R233 179 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 ARPC5O15511 151 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 NDUFB6O95139 128 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TGM6O95932 706 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 GALNSP34059 522 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 RNF4P78317 190 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 ANKRD16Q6P6B7 361 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 PLXDC1Q8IUK5 500 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 SPACA5Q96QH8 159 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 MICU1Q9BPX6 476 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 AKIRIN1Q9H9L7 192 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 EPHA6Q9UF33 1036 aa9.4□□□□□ -0.9
TOP3A-209ENST00000580095 FARSAQ9Y285 508 aaKnown RBP9.4□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM265A0A087WTH1 108 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 TRAV20A0A0B4J274 112 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 H7C417 338 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 P2RY10O00398 339 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 MBTPS2O43462 519 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 DUX1O43812 170 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 NPIPB7O75200 414 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 DXOO77932 396 aaKnown RBP9.39□□□□□ -0.91
TOP3A-209ENST00000580095 RIDAP52758 137 aaKnown RBP9.39□□□□□ -0.91
TOP3A-209ENST00000580095 RAG2P55895 527 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 MUC20Q8N307 709 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-209ENST00000580095 ACBD4Q8NC06 268 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 RNF128Q8TEB7 428 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 BCL2L14Q9BZR8 327 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 B3GNT2Q9NY97 397 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 FXYD6-FXYD2A0A087WZ82 144 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 MS4A18H0YCH9 400 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 GOSR2O14653 212 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 SLC2A1P11166 492 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF35P13682 527 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF28P17035 718 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 GLO1Q04760 184 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 NKPD1Q17RQ9 610 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 MS4A18Q3C1V0 323 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 OGFOD3Q6PK18 319 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 TSSK4Q6SA08 328 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 SEZ6L2Q6UXD5 910 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 RNF144BQ7Z419 303 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 GRINAQ7Z429 371 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 PRSS42Q7Z5A4 293 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 CDH24Q86UP0 819 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 D2HGDHQ8N465 521 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF565Q8N9K5 539 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 OR13C3Q8NGS6 347 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF501Q96CX3 271 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-209ENST00000580095 C5orf34Q96MH7 638 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 SFXN2Q96NB2 322 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 TINAGL1Q9GZM7 467 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-209ENST00000580095 FXYD6Q9H0Q3 95 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-209ENST00000580095 UCK1Q9HA47 277 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 ETV7Q9Y603 341 aa9.39□□□□□ -0.91
TOP3A-209ENST00000580095 LOC107986453A0A1B0GWG9 222 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 TMEM235A6NFC5 223 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ADAM10O14672 748 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 EIF4E2O60573 245 aaKnown RBP9.38□□□□□ -0.91
TOP3A-209ENST00000580095 KLK2P20151 261 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 ANOS1P23352 680 aa9.38□□□□□ -0.91
TOP3A-209ENST00000580095 PRSS3P35030 304 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms