RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 NKIRAS2Q9NYR9 191 aa12.71□□□□□ -0.37
SS18-212ENST00000579061 ATPIF1Q9UII2 106 aa12.71□□□□□ -0.37
SS18-212ENST00000579061 ANK3Q12955 4377 aaKnown RBP12.71□□□□□ -0.37
SS18-212ENST00000579061 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
SS18-212ENST00000579061 JMJD1CQ15652 2540 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 AQP12BA6NM10 295 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 C17orf100A8MU93 164 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 ACOT8O14734 319 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 DOK2O60496 412 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 CRLF1O75462 422 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 CCNB2O95067 398 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 MT-ND5P03915 603 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 TACSTD2P09758 323 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 RAP2AP10114 183 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 HIST1H1CP16403 213 aaKnown RBP12.7□□□□□ -0.38
SS18-212ENST00000579061 ZNF23P17027 643 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 NOS3P29474 1203 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 GCH1P30793 250 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 ARHGDIAP52565 204 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 RIN1Q13671 783 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 GGTLC2Q14390 218 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
SS18-212ENST00000579061 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 ELFN2Q5R3F8 820 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 C6orf52Q5T4I8 152 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 MBNL2Q5VZF2 373 aaKnown RBP12.7□□□□□ -0.38
SS18-212ENST00000579061 CYB5R2Q6BCY4 276 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 OR2T5Q6IEZ7 315 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 LEG1Q6P5S2 330 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 RASSF6Q6ZTQ3 369 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 AQP12AQ8IXF9 295 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 ICA1LQ8NDH6 482 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 OR52L1Q8NGH7 329 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 OR2T29Q8NH02 315 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 RDH5Q92781 318 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 CLPTM1LQ96KA5 538 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 C4orf45Q96LM5 186 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 THTPAQ9BU02 230 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 RERGLQ9H628 205 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 REEP1Q9H902 201 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 HINT3Q9NQE9 182 aaKnown RBP12.7□□□□□ -0.38
SS18-212ENST00000579061 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 TBCCD1Q9NVR7 557 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 IL20Q9NYY1 176 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
SS18-212ENST00000579061 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 A8MV72 311 aaPredicted RBP12.69□□□□□ -0.38
SS18-212ENST00000579061 DCTN6O00399 190 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 UBOX5O94941 541 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 IGHV4-31P0DP07 118 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 NAT2P11245 290 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 ACHEP22303 614 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 LIPAP38571 399 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 HTR5AP47898 357 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 PPP1CBP62140 327 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 TMEM154Q6P9G4 183 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
SS18-212ENST00000579061 ZBTB46Q86UZ6 589 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 OR9Q2Q8NGE9 314 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 OR4K13Q8NH42 304 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 SLC25A40Q8TBP6 338 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 CCDC124Q96CT7 223 aaKnown RBP12.69□□□□□ -0.38
SS18-212ENST00000579061 NMNAT3Q96T66 252 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 DGCR6LQ9BY27 220 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 CHODLQ9H9P2 273 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 TMEM160Q9NX00 188 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 PLEK2Q9NYT0 353 aa12.69□□□□□ -0.38
SS18-212ENST00000579061 CGGBP1Q9UFW8 167 aaPredicted RBP12.69□□□□□ -0.38
SS18-212ENST00000579061 SAMHD1Q9Y3Z3 626 aaKnown RBP12.69□□□□□ -0.38
SS18-212ENST00000579061 ABCA2Q9BZC7 2435 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 OR6C6A6NF89 314 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 J3QW42 95 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 GYG2O15488 501 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 MPZL1O95297 269 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 ABHD16AO95870 558 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 GASTP01350 101 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 HPXP02790 462 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 GAAP10253 952 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 GSTM3P21266 225 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 CHN2P52757 468 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 HIST1H3AP68431 136 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 GLO1Q04760 184 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 MICAQ29983 383 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 SLC36A3Q495N2 470 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 HIST2H3PS2Q5TEC6 136 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 RFPL4BQ6ZWI9 263 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 HIST2H3AQ71DI3 136 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 ADGRG5Q8IZF4 528 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 OR6V1Q8N148 313 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 GJC3Q8NFK1 279 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 KLF14Q8TD94 323 aaPredicted RBP12.68□□□□□ -0.38
SS18-212ENST00000579061 IPCEF1Q8WWN9 437 aaPredicted RBP12.68□□□□□ -0.38
SS18-212ENST00000579061 HPS1Q92902 700 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 COG8Q96MW5 612 aa12.68□□□□□ -0.38
SS18-212ENST00000579061 TSSK2Q96PF2 358 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms