RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MAST4O15021 2626 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CELSR1Q9NYQ6 3014 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ANK3Q12955 4377 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 IGHV1-18A0A0C4DH31 117 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 A0A1W2PR80 420 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 A0A1W2PRG6 482 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 DPRXA6NFQ7 191 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 A6NIZ1 184 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM183AA6NL82 134 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SHISA9B4DS77 424 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF587BE7ETH6 402 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 M0R3G1 203 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC16A6O15403 523 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ARHGEF9O43307 516 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 PRKYO43930 277 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 E2F6O75461 281 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CTAG2O75638 210 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 MPZL1O95297 269 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 STAMBPO95630 424 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SNAP29O95721 258 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 PLAUP00749 431 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 IGHG1P01857 330 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST1H2ABP04908 130 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ADRA2AP08913 450 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 QDPRP09417 244 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 B4GALT1P15291 398 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF23P17027 643 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SPI1P17947 270 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 IGFBP5P24593 272 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CALCRP30988 508 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 OTX1P32242 354 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CDAP32320 146 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 IFNGR2P38484 337 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ALDH3A2P51648 485 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A1P53007 311 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SH3BGRP55822 239 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 RAP1BP61224 184 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ESRRGP62508 458 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 RAP1AP62834 184 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 TUBA1BP68363 451 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 TUBA4AP68366 448 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 NKX6-1P78426 367 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ADARB1P78563 741 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SPOCK1Q08629 439 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 NPRL3Q12980 569 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 C1DQ13901 141 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 GGTLC2Q14390 218 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 GINS1Q14691 196 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 C3orf36Q3SXR2 165 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CLEC12AQ5QGZ9 265 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 THEM4Q5T1C6 240 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC35F1Q5T1Q4 408 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 NCMAPQ5T1S8 102 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 C1QTNF12Q5T7M4 302 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM27BQ5VT28 67 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 C9orf135Q5VTT2 229 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CARD17Q5XLA6 110 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SP5Q6BEB4 398 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 LEG1Q6P5S2 330 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ANKRD16Q6P6B7 361 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 KLHL24Q6TFL4 600 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 MEX3BQ6ZN04 569 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 TUBA1AQ71U36 451 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST3H2AQ7L7L0 130 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 BCDIN3DQ7Z5W3 292 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 P2RY8Q86VZ1 359 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 TIGD4Q8IY51 512 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF100Q8IYN0 542 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CDK20Q8IZL9 346 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC22A24Q8N4F4 322 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 PAQR4Q8N4S7 273 aaPredicted RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 RFLNBQ8N5W9 214 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM169BQ8N8A8 192 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 CYB561A3Q8NBI2 242 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ICA1LQ8NDH6 482 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 BBS1Q8NFJ9 593 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 STEAP2Q8NFT2 490 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 OR2T33Q8NG76 320 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 OR52E2Q8NGJ4 325 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 OR4K13Q8NH42 304 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM222BQ8WU58 562 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 APH1BQ8WW43 257 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST1H2ACQ93077 130 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF503Q96F45 646 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 DACH2Q96NX9 599 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 AMELYQ99218 206 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF649Q9BS31 505 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 IFT27Q9BW83 186 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ULBP2Q9BZM5 246 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 DCLRE1BQ9H816 532 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 PLEKHF2Q9H8W4 249 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 MED20Q9H944 212 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 POLE4Q9NR33 117 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 PAPOLBQ9NRJ5 636 aaKnown RBP3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 KRT84Q9NSB2 600 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 TBC1D23Q9NUY8 699 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ERVK13-1Q9NX77 482 aa3.28□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF226Q9NYT6 803 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms