RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 TFAP2AP05549 437 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 MMP7P09237 267 aaPredicted RBP14.13□□□□□ -0.15
SS18-211ENST00000578954 PSMB1P20618 241 aaKnown RBP14.13□□□□□ -0.15
SS18-211ENST00000578954 BMP5P22003 454 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 GNLYP22749 145 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 CD79BP40259 229 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 CAPZA2P47755 286 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 WNT4P56705 351 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 ADORA2A-AS1P86434 159 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 EIF2B1Q14232 305 aaKnown RBP14.13□□□□□ -0.15
SS18-211ENST00000578954 GABRA6Q16445 453 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 TBRG1Q3YBR2 411 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 C9orf135Q5VTT2 229 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 TMEM154Q6P9G4 183 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 DEGS2Q6QHC5 323 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 ZNF367Q7RTV3 350 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 DCXRQ7Z4W1 244 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 CCDC36Q8IYA8 594 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 C17orf78Q8N4C9 275 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 OR10S1Q8NGN2 331 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 OR2AJ1Q8NGZ0 328 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 MUL1Q969V5 352 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 SH3GL3Q99963 347 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 VCX3AQ9NNX9 186 aa14.13□□□□□ -0.15
SS18-211ENST00000578954 PNRC2Q9NPJ4 139 aaKnown RBP14.13□□□□□ -0.15
SS18-211ENST00000578954 MRM2Q9UI43 246 aaKnown RBP14.13□□□□□ -0.15
SS18-211ENST00000578954 PCNX1Q96RV3 2341 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 ARPC4-TTLL3A0A0A6YYG9 625 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 WNT11O96014 354 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 UQCRFS1P47985 274 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 ALDH3B2P48448 385 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 NR1H2P55055 460 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 PCBD1P61457 104 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 ACSM1Q08AH1 577 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 SCRN3Q0VDG4 424 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 DOC2BQ14184 412 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 IGFBP7Q16270 282 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 SLC25A35Q3KQZ1 300 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 C4orf17Q53FE4 359 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 SFRP5Q5T4F7 317 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 C1QTNF12Q5T7M4 302 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 OR2G6Q5TZ20 316 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 OR7E24Q6IFN5 339 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 MTFR2Q6P444 385 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 KCTD18Q6PI47 426 aaPredicted RBP14.12□□□□□ -0.15
SS18-211ENST00000578954 CORO6Q6QEF8 472 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 TMPRSS11AQ6ZMR5 421 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 CFAP77Q6ZQR2 320 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 PLEKHG7Q6ZR37 379 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 SLC16A14Q7RTX9 510 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 KCTD20Q7Z5Y7 419 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 ZNF679Q8IYX0 411 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 LRRC18Q8N456 261 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 GJC3Q8NFK1 279 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 THEM6Q8WUY1 208 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 CCDC120Q96HB5 630 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 OR5M11Q96RB7 305 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 ISYNA1Q9NPH2 558 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 DDX28Q9NUL7 540 aaKnown RBP14.12□□□□□ -0.15
SS18-211ENST00000578954 ELOVL5Q9NYP7 299 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 CACNA1CQ13936 2221 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 HIVEP3Q5T1R4 2406 aa14.12□□□□□ -0.15
SS18-211ENST00000578954 RER1O15258 196 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 ZNF254O75437 659 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 LYZL6O75951 148 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 MT-ND5P03915 603 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 LCKP06239 509 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 ZNF32P17041 273 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 CHRNB4P30926 498 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 OPRL1P41146 370 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 BDH1Q02338 343 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 BLMHQ13867 455 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 SPHARQ15513 63 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 FBXL19-AS1Q494R0 122 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 SLC36A2Q495M3 483 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 CCDC92Q53HC0 331 aaPredicted RBP14.11□□□□□ -0.15
SS18-211ENST00000578954 SYT6Q5T7P8 510 aaPredicted RBP14.11□□□□□ -0.15
SS18-211ENST00000578954 STAC2Q6ZMT1 411 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 FJX1Q86VR8 437 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 CXorf67Q86X51 503 aaPredicted RBP14.11□□□□□ -0.15
SS18-211ENST00000578954 FGFBP3Q8TAT2 258 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 HAVCR2Q8TDQ0 301 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 SNX33Q8WV41 574 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 SPRYD4Q8WW59 207 aaPredicted RBP14.11□□□□□ -0.15
SS18-211ENST00000578954 ASB5Q8WWX0 329 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 SLAMF6Q96DU3 332 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 C4orf36Q96KX1 117 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 COG8Q96MW5 612 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 KCNN2Q9H2S1 579 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 OBP2BQ9NPH6 170 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 B3GNT2Q9NY97 397 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 ATPIF1Q9UII2 106 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 TIMM10BQ9Y5J6 103 aa14.11□□□□□ -0.15
SS18-211ENST00000578954 FAM208BQ5VWN6 2430 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 A0A096LPE4 126 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 A0A1W2PPZ6 126 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 ZNF503-AS2A6NEH8 195 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 METTL15A6NJ78 407 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 EEF1E1-BLOC1S5C9J1V9 151 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 ZNF878C9JN71 531 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms