RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FCGR2AP12318 317 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 POLR2HP52434 150 aaKnown RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 MALLQ13021 153 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 Q5BKY6 102 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 SEZ6L2Q6UXD5 910 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 HDAC8Q9BY41 377 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 MMP26Q9NRE1 261 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMED7-TICAM2A0A0A6YYA0 188 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 SFTA3P0C7M3 94 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ATP1B3P54709 279 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 RPL27P61353 136 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 EMC4Q5J8M3 183 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 RAET1LQ5VY80 246 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OGFOD3Q6PK18 319 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 MARCH3Q86UD3 253 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 PTP4A1Q93096 173 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 RSPRY1Q96DX4 576 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 UBL7Q96S82 380 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 TOLLIPQ9H0E2 274 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 FBRSQ9HAH7 460 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR6C76A6NM76 312 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CD300LBA8K4G0 201 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CFDP00746 253 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OPN1LWP04000 364 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CCL5P13501 91 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 Q6ZSR6 202 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR4S1Q8NGB4 309 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR56B2PQ8NGI1 322 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ALG14Q96F25 216 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 SGCZQ96LD1 299 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 C2orf50Q96LR7 162 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF75AQ96N20 296 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF346Q9UL40 294 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 HSPB2A8KAH6 182 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 HCRTR1O43613 425 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 IGFBP4P22692 258 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 HOXA1P49639 335 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 IL10RAQ13651 578 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC17A1Q14916 467 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 UBXN2BQ14CS0 331 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 HSPB2Q16082 182 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF239Q16600 458 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 KIRREL2Q6UWL6 708 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF793Q6ZN11 406 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 RCBTB1Q8NDN9 531 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR13C8Q8NGS7 320 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR14L1PQ8NHC6 308 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CPNE4Q96A23 557 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 GPA33Q99795 319 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 LRIT1Q9P2V4 623 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CCDC88CQ9P219 2028 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 LOC105371267A0A1B0GV96 52 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 NMBP08949 121 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 TBPP20226 339 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 EFNA3P52797 238 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 DCAF7P61962 342 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 RPL18Q07020 188 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 FABP9Q0Z7S8 132 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF74Q16587 644 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CBLN2Q8IUK8 224 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 DEFB119Q8N690 84 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 RBMXL1Q96E39 390 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 CCNL2Q96S94 520 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 VN1R3Q9BXE9 311 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 METTL9Q9H1A3 318 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 MBNL1Q9NR56 388 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 GAR1Q9NY12 217 aaKnown RBP11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 GPR160Q9UJ42 338 aa11.94□□□□□ -0.5
PCDHGB3-201ENST00000576222 A0A0U1RQK1 487 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 LRP3O75074 770 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 GCM2O75603 506 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 IGF2P01344 180 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 CASRP41180 1078 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 ECI1P42126 302 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 RABIFP47224 123 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 DHPSP49366 369 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 PWWP2BQ6NUJ5 590 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 RPUSD3Q6P087 351 aaKnown RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 ANKRD16Q6P6B7 361 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC39A5Q6ZMH5 540 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 EXD3Q8N9H8 876 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 SFT2D1Q8WV19 159 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLCO1C1Q9NYB5 712 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 FAM221BA6H8Z2 402 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 IDSB3KWA1 339 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 PLP2Q04941 152 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF770Q6IQ21 691 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 BCL7CQ8WUZ0 217 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 SIGLEC11Q96RL6 698 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 LPAR4Q99677 370 aa11.93□□□□□ -0.5
PCDHGB3-201ENST00000576222 PAPOLGQ9BWT3 736 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms